Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4255

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,950,957	+				-0.7
4,950,958	-				+1.1
4,951,245	+		Pf6N2E2_4254	0.35	-0.1
4,951,246	-		Pf6N2E2_4254	0.35	+0.2
4,951,249	+		Pf6N2E2_4254	0.35	-1.4
4,951,249	+		Pf6N2E2_4254	0.35	+0.4
4,951,250	-		Pf6N2E2_4254	0.35	+0.2
4,951,250	-		Pf6N2E2_4254	0.35	+0.5
4,951,296	+		Pf6N2E2_4254	0.40	+1.3
4,951,297	-		Pf6N2E2_4254	0.40	+0.4
4,951,297	-		Pf6N2E2_4254	0.40	+0.0
4,951,315	-		Pf6N2E2_4254	0.41	+1.6
4,952,040	+				+0.2
4,952,040	+				-0.0
4,952,040	+				-0.3
4,952,085	+				-0.2
4,952,085	+				-1.2
4,952,086	-				-0.0
4,952,086	-				+0.7
4,952,086	-				+0.1
4,952,138	+		Pf6N2E2_4255	0.11	-0.1
4,952,138	+		Pf6N2E2_4255	0.11	-0.4
4,952,676	-		Pf6N2E2_4255	0.39	+0.2
4,952,687	+		Pf6N2E2_4255	0.40	-0.7
4,952,687	+		Pf6N2E2_4255	0.40	-1.2
4,952,687	+		Pf6N2E2_4255	0.40	+0.1
4,952,688	-		Pf6N2E2_4255	0.40	-0.4
4,952,688	-		Pf6N2E2_4255	0.40	-0.7
4,952,688	-		Pf6N2E2_4255	0.40	+0.6
4,952,688	-		Pf6N2E2_4255	0.40	-0.6
4,952,908	+		Pf6N2E2_4255	0.51	+1.1
4,952,909	-		Pf6N2E2_4255	0.51	-0.3
4,952,917	+		Pf6N2E2_4255	0.52	+0.3
4,952,918	-		Pf6N2E2_4255	0.52	-0.2
4,952,918	-		Pf6N2E2_4255	0.52	-0.4
4,952,927	+		Pf6N2E2_4255	0.52	-0.2
4,952,927	+		Pf6N2E2_4255	0.52	-1.2
4,952,927	+		Pf6N2E2_4255	0.52	-0.5
4,952,927	+		Pf6N2E2_4255	0.52	-0.1
4,952,928	-		Pf6N2E2_4255	0.52	-0.2
4,952,928	-		Pf6N2E2_4255	0.52	-0.0
4,953,333	+		Pf6N2E2_4255	0.73	+0.1
4,953,751	+				-0.8
4,953,751	+				-2.8
4,953,752	-				+0.4
4,953,761	-				-0.7
4,953,768	+				+0.6
4,953,769	-				+1.6
4,953,769	-				+1.5
4,953,769	-				+1.2
4,953,774	+				+0.2
4,953,774	+				+0.8
4,953,774	+				+0.9
4,953,774	+				+0.2
4,953,775	-				+0.4
4,953,775	-				-0.4
4,953,775	-				-0.6
4,953,775	-				-0.7
4,953,775	-				+0.3
4,953,775	-				-0.6
4,953,775	-				+1.9
4,953,775	-				+1.6
4,953,775	-				-0.8
4,953,775	-				+0.6
4,953,778	+				-1.6
4,953,778	+				+0.3
4,953,779	-				-0.2
4,953,902	+				+0.4
4,953,902	+				-2.7
4,953,903	-				-0.3
4,953,903	-				+0.2
4,953,945	-				-1.5
4,953,955	+				+0.8
4,953,956	-				-1.7
4,953,982	+				+0.3
4,953,982	+				+0.4
4,954,027	-				+0.6
4,954,071	+				-1.0
4,954,072	-				-0.8
4,954,195	-				+0.6
4,954,355	+		Pf6N2E2_4256	0.19	+0.9
4,954,356	-		Pf6N2E2_4256	0.19	-1.0
4,954,356	-		Pf6N2E2_4256	0.19	-0.4
4,954,356	-		Pf6N2E2_4256	0.19	-0.2
4,954,356	-		Pf6N2E2_4256	0.19	-0.3
4,954,361	+		Pf6N2E2_4256	0.19	-0.4
4,954,361	+		Pf6N2E2_4256	0.19	+0.4
4,954,361	+		Pf6N2E2_4256	0.19	+1.0
4,954,361	+		Pf6N2E2_4256	0.19	+1.1
4,954,362	-		Pf6N2E2_4256	0.19	+0.4
4,954,382	+		Pf6N2E2_4256	0.21	-0.3
4,954,382	+		Pf6N2E2_4256	0.21	-0.8
4,954,382	+		Pf6N2E2_4256	0.21	-0.1
4,954,382	+		Pf6N2E2_4256	0.21	-0.1
4,954,382	+		Pf6N2E2_4256	0.21	+1.6
4,954,382	+		Pf6N2E2_4256	0.21	+0.4
4,954,383	-		Pf6N2E2_4256	0.21	-0.9
4,954,389	+		Pf6N2E2_4256	0.22	+0.5
4,954,390	-		Pf6N2E2_4256	0.22	-1.0
4,954,390	-		Pf6N2E2_4256	0.22	+0.1
4,954,390	-		Pf6N2E2_4256	0.22	-0.0
4,954,390	-				+0.6
4,954,390	-		Pf6N2E2_4256	0.22	+0.8
4,954,390	-		Pf6N2E2_4256	0.22	-0.5
4,954,390	-		Pf6N2E2_4256	0.22	-0.6
4,954,412	+		Pf6N2E2_4256	0.24	-0.6
4,954,412	+		Pf6N2E2_4256	0.24	-0.4
4,954,413	-		Pf6N2E2_4256	0.24	+0.2
4,954,500	+		Pf6N2E2_4256	0.32	-1.0
4,954,500	+		Pf6N2E2_4256	0.32	-0.2
4,954,500	+		Pf6N2E2_4256	0.32	-1.7
4,954,514	+		Pf6N2E2_4256	0.34	+0.2
4,954,514	+		Pf6N2E2_4256	0.34	+0.6
4,954,515	-		Pf6N2E2_4256	0.34	+0.2
4,954,515	-		Pf6N2E2_4256	0.34	+0.1
4,954,556	+		Pf6N2E2_4256	0.38	+0.3
4,954,595	-		Pf6N2E2_4256	0.41	-0.0
4,954,683	-		Pf6N2E2_4256	0.50	-0.0
4,954,732	+		Pf6N2E2_4256	0.54	+1.2
4,954,732	+		Pf6N2E2_4256	0.54	+0.5
4,954,732	+		Pf6N2E2_4256	0.54	+1.0
4,954,732	+		Pf6N2E2_4256	0.54	-0.7
4,954,732	+		Pf6N2E2_4256	0.54	+0.2
4,954,733	-		Pf6N2E2_4256	0.54	-0.6