Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07640
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,616,963 | + | BWI76_RS07630 | 0.80 | -0.7 | |
1,617,084 | + | BWI76_RS07630 | 0.86 | -0.4 | |
1,617,371 | + | +0.5 | |||
1,617,637 | + | BWI76_RS07635 | 0.25 | +0.2 | |
1,617,647 | - | BWI76_RS07635 | 0.31 | -0.4 | |
1,617,647 | - | BWI76_RS07635 | 0.31 | -1.7 | |
1,617,660 | + | +0.9 | |||
1,617,668 | - | BWI76_RS07635 | 0.45 | -0.5 | |
1,617,668 | - | BWI76_RS07635 | 0.45 | +0.3 | |
1,617,800 | + | -0.8 | |||
1,617,807 | - | +0.8 | |||
1,617,890 | + | -0.6 | |||
1,617,890 | - | +0.5 | |||
1,618,235 | - | BWI76_RS07640 | 0.37 | -0.9 | |
1,618,235 | - | BWI76_RS07640 | 0.37 | -0.7 | |
1,618,272 | + | BWI76_RS07640 | 0.42 | -2.5 | |
1,618,777 | - | -0.7 | |||
1,619,180 | - | BWI76_RS07645 | 0.31 | +0.3 | |
1,619,468 | - | BWI76_RS07645 | 0.67 | -1.1 |
Or see this region's nucleotide sequence