Experiment: Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14915 and BWI76_RS14920 are separated by 427 nucleotides BWI76_RS14920 and BWI76_RS14925 overlap by 4 nucleotides BWI76_RS14925 and BWI76_RS14930 are separated by 24 nucleotides
BWI76_RS14915: BWI76_RS14915 - hypothetical protein, at 3,126,469 to 3,126,975
_RS14915
BWI76_RS14920: BWI76_RS14920 - ABC transporter permease, at 3,127,403 to 3,128,410
_RS14920
BWI76_RS14925: BWI76_RS14925 - ABC transporter substrate-binding protein, at 3,128,407 to 3,129,363
_RS14925
BWI76_RS14930: BWI76_RS14930 - hypothetical protein, at 3,129,388 to 3,130,197
_RS14930
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3126.456 kb on - strand at 3126.456 kb on - strand at 3126.583 kb on + strand, within BWI76_RS14915 at 3126.591 kb on - strand at 3126.615 kb on - strand, within BWI76_RS14915 at 3126.711 kb on - strand at 3126.713 kb on - strand, within BWI76_RS14915 at 3126.877 kb on - strand, within BWI76_RS14915 at 3126.882 kb on - strand, within BWI76_RS14915 at 3126.891 kb on - strand, within BWI76_RS14915 at 3126.983 kb on - strand at 3126.994 kb on - strand at 3127.086 kb on + strand at 3127.153 kb on - strand at 3127.155 kb on + strand at 3127.368 kb on + strand at 3127.376 kb on - strand at 3127.401 kb on + strand at 3127.426 kb on + strand at 3127.541 kb on - strand, within BWI76_RS14920 at 3127.616 kb on + strand, within BWI76_RS14920 at 3127.710 kb on - strand, within BWI76_RS14920 at 3127.763 kb on + strand, within BWI76_RS14920 at 3127.771 kb on - strand, within BWI76_RS14920 at 3127.777 kb on - strand, within BWI76_RS14920 at 3127.856 kb on + strand, within BWI76_RS14920 at 3128.045 kb on + strand, within BWI76_RS14920 at 3128.169 kb on - strand, within BWI76_RS14920 at 3128.190 kb on + strand, within BWI76_RS14920 at 3128.233 kb on - strand, within BWI76_RS14920 at 3128.385 kb on - strand at 3128.672 kb on - strand, within BWI76_RS14925 at 3128.743 kb on + strand, within BWI76_RS14925 at 3128.910 kb on - strand, within BWI76_RS14925 at 3128.915 kb on - strand, within BWI76_RS14925 at 3129.255 kb on + strand, within BWI76_RS14925 at 3129.288 kb on - strand at 3129.397 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL remove 3,126,456 - +0.6 3,126,456 - -1.0 3,126,583 + BWI76_RS14915 0.22 +0.1 3,126,591 - -1.6 3,126,615 - BWI76_RS14915 0.29 +0.0 3,126,711 - -1.0 3,126,713 - BWI76_RS14915 0.48 +1.2 3,126,877 - BWI76_RS14915 0.80 -1.3 3,126,882 - BWI76_RS14915 0.81 -1.3 3,126,891 - BWI76_RS14915 0.83 +0.6 3,126,983 - -0.3 3,126,994 - +1.0 3,127,086 + -1.0 3,127,153 - +0.2 3,127,155 + +0.6 3,127,368 + -0.0 3,127,376 - -2.0 3,127,401 + +0.4 3,127,426 + -1.0 3,127,541 - BWI76_RS14920 0.14 +0.5 3,127,616 + BWI76_RS14920 0.21 +2.0 3,127,710 - BWI76_RS14920 0.30 +0.6 3,127,763 + BWI76_RS14920 0.36 +1.0 3,127,771 - BWI76_RS14920 0.37 -0.2 3,127,777 - BWI76_RS14920 0.37 +0.9 3,127,856 + BWI76_RS14920 0.45 +0.7 3,128,045 + BWI76_RS14920 0.64 +0.8 3,128,169 - BWI76_RS14920 0.76 -1.1 3,128,190 + BWI76_RS14920 0.78 +0.4 3,128,233 - BWI76_RS14920 0.82 +0.4 3,128,385 - -1.8 3,128,672 - BWI76_RS14925 0.28 -0.4 3,128,743 + BWI76_RS14925 0.35 -0.6 3,128,910 - BWI76_RS14925 0.53 +0.9 3,128,915 - BWI76_RS14925 0.53 -1.3 3,129,255 + BWI76_RS14925 0.89 -0.7 3,129,288 - -0.0 3,129,397 + +0.1
Or see this region's nucleotide sequence