Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00070 and BWI76_RS00075 are separated by 50 nucleotides BWI76_RS00075 and BWI76_RS00080 overlap by 4 nucleotides BWI76_RS00080 and BWI76_RS00085 overlap by 4 nucleotides
BWI76_RS00070: BWI76_RS00070 - MFS transporter, at 13,479 to 14,969
_RS00070
BWI76_RS00075: BWI76_RS00075 - N-acetylmannosamine-6-phosphate 2-epimerase, at 15,020 to 15,709
_RS00075
BWI76_RS00080: BWI76_RS00080 - N-acetylmannosamine kinase, at 15,706 to 16,581
_RS00080
BWI76_RS00085: BWI76_RS00085 - hypothetical protein, at 16,578 to 17,042
_RS00085
Position (kb) 15
16 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 14.184 kb on + strand, within BWI76_RS00070 at 14.246 kb on + strand, within BWI76_RS00070 at 14.277 kb on + strand, within BWI76_RS00070 at 14.277 kb on - strand, within BWI76_RS00070 at 14.285 kb on - strand, within BWI76_RS00070 at 14.285 kb on - strand, within BWI76_RS00070 at 14.285 kb on - strand, within BWI76_RS00070 at 14.389 kb on - strand, within BWI76_RS00070 at 14.548 kb on - strand, within BWI76_RS00070 at 14.607 kb on - strand, within BWI76_RS00070 at 14.673 kb on - strand, within BWI76_RS00070 at 14.759 kb on + strand, within BWI76_RS00070 at 14.884 kb on + strand at 14.922 kb on - strand at 14.925 kb on - strand at 14.925 kb on - strand at 15.018 kb on - strand at 15.089 kb on + strand, within BWI76_RS00075 at 15.320 kb on - strand, within BWI76_RS00075 at 15.361 kb on + strand, within BWI76_RS00075 at 16.009 kb on + strand, within BWI76_RS00080 at 16.225 kb on + strand, within BWI76_RS00080 at 16.451 kb on + strand, within BWI76_RS00080 at 16.461 kb on + strand, within BWI76_RS00080 at 16.469 kb on - strand, within BWI76_RS00080 at 16.514 kb on - strand at 16.529 kb on - strand at 16.601 kb on - strand at 16.609 kb on + strand at 16.616 kb on + strand at 16.631 kb on + strand, within BWI76_RS00085 at 16.631 kb on + strand, within BWI76_RS00085
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 14,184 + BWI76_RS00070 0.47 +1.3 14,246 + BWI76_RS00070 0.51 +0.1 14,277 + BWI76_RS00070 0.54 -0.2 14,277 - BWI76_RS00070 0.54 +0.2 14,285 - BWI76_RS00070 0.54 -0.0 14,285 - BWI76_RS00070 0.54 -0.0 14,285 - BWI76_RS00070 0.54 +3.0 14,389 - BWI76_RS00070 0.61 +0.5 14,548 - BWI76_RS00070 0.72 +0.6 14,607 - BWI76_RS00070 0.76 -1.5 14,673 - BWI76_RS00070 0.80 +0.4 14,759 + BWI76_RS00070 0.86 +1.8 14,884 + -1.5 14,922 - -1.1 14,925 - +0.5 14,925 - +0.3 15,018 - +2.6 15,089 + BWI76_RS00075 0.10 -2.7 15,320 - BWI76_RS00075 0.43 +0.4 15,361 + BWI76_RS00075 0.49 +2.5 16,009 + BWI76_RS00080 0.35 +0.0 16,225 + BWI76_RS00080 0.59 -1.5 16,451 + BWI76_RS00080 0.85 +0.6 16,461 + BWI76_RS00080 0.86 -0.3 16,469 - BWI76_RS00080 0.87 -1.4 16,514 - +0.3 16,529 - -1.5 16,601 - -1.6 16,609 + -0.3 16,616 + -2.8 16,631 + BWI76_RS00085 0.11 +0.1 16,631 + BWI76_RS00085 0.11 +0.1
Or see this region's nucleotide sequence