Strain Fitness in Agrobacterium fabrum C58 around Atu3098

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
104,290	+				+1.5
104,326	-				-0.3
104,326	-				+0.5
104,346	-				-0.2
104,346	-				-0.4
104,449	+				-0.1
104,492	-		Atu3097	0.12	+0.3
104,492	-		Atu3097	0.12	+0.9
104,642	+		Atu3097	0.29	-0.8
104,652	+		Atu3097	0.30	-0.2
104,652	+		Atu3097	0.30	-0.4
104,713	-		Atu3097	0.37	+0.3
104,759	-		Atu3097	0.42	+0.1
104,847	+		Atu3097	0.52	+0.3
104,852	+		Atu3097	0.53	+0.2
104,895	+		Atu3097	0.58	-2.4
104,897	-		Atu3097	0.58	-0.7
104,963	-		Atu3097	0.65	+1.4
104,965	+		Atu3097	0.65	-0.6
104,973	-		Atu3097	0.66	-0.1
104,992	+		Atu3097	0.68	-0.0
105,013	+		Atu3097	0.71	+0.8
105,106	+		Atu3097	0.81	+0.4
105,186	+				+1.2
105,194	-				-0.4
105,219	+				-0.2
105,295	+				-0.8
105,295	+				-0.5
105,295	+				+1.0
105,303	-				-0.2
105,315	-				-0.0
105,343	-				+0.3
105,389	-		Atu3098	0.12	+1.0
105,399	+		Atu3098	0.13	+0.3
105,399	+		Atu3098	0.13	+0.3
105,420	-		Atu3098	0.16	-0.7
105,420	-		Atu3098	0.16	-0.1
105,422	-		Atu3098	0.16	-0.6
105,498	-		Atu3098	0.25	-1.1
105,498	-		Atu3098	0.25	-0.3
105,600	+		Atu3098	0.36	-0.2
105,649	+		Atu3098	0.42	-0.2
105,649	+		Atu3098	0.42	+0.5
105,657	-		Atu3098	0.43	+0.5
105,657	-		Atu3098	0.43	+0.2
105,657	-		Atu3098	0.43	+0.7
105,695	-		Atu3098	0.47	-0.3
105,716	-		Atu3098	0.49	-0.2
105,716	-		Atu3098	0.49	+0.4
105,733	-		Atu3098	0.51	+0.3
105,757	+		Atu3098	0.54	+0.4
105,958	+		Atu3098	0.77	+0.2
105,975	+		Atu3098	0.79	-0.4
106,014	-		Atu3098	0.83	+0.0
106,179	-				-1.4
106,247	+				-1.4
106,257	+				+0.3
106,257	+				+0.2
106,265	-				+0.4
106,347	+		Atu3099	0.13	+0.1
106,393	+		Atu3099	0.18	+0.3
106,401	+		Atu3099	0.18	+0.7
106,409	-		Atu3099	0.19	+0.4
106,427	+		Atu3099	0.21	+0.4
106,580	-		Atu3099	0.34	+0.4
106,622	+		Atu3099	0.38	+0.7
106,630	-		Atu3099	0.39	-0.4
106,678	+		Atu3099	0.43	-0.4
106,678	+		Atu3099	0.43	-0.6
106,689	+		Atu3099	0.44	+0.2
106,817	+		Atu3099	0.55	+0.3
106,822	+		Atu3099	0.56	+0.7
106,830	-		Atu3099	0.57	+0.6
106,879	-		Atu3099	0.61	-0.0
106,952	-		Atu3099	0.67	-1.2
106,981	-		Atu3099	0.70	+0.3
107,034	+		Atu3099	0.75	-0.0
107,055	+		Atu3099	0.77	+2.4
107,125	+		Atu3099	0.83	+0.7