Strain Fitness in Agrobacterium fabrum C58 around Atu3027

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
21,385	+		Atu8093	0.23	+1.1
21,508	+		Atu8093	0.33	-0.7
21,516	-		Atu8093	0.34	-0.5
21,516	-		Atu8093	0.34	-0.5
21,671	-		Atu8093	0.47	-0.8
21,676	+		Atu8093	0.48	-0.5
21,790	-		Atu8093	0.57	-0.2
21,968	+		Atu8093	0.72	-0.0
22,130	+		Atu8093	0.86	+0.1
22,192	-				+0.2
22,214	+				+0.1
22,219	+				+1.0
22,305	+				-0.4
22,368	+				-0.2
22,375	+				-0.3
22,437	+		Atu3027	0.11	-0.9
22,507	+		Atu3027	0.18	-1.0
22,526	-		Atu3027	0.20	-0.3
22,590	+		Atu3027	0.27	-0.4
22,597	-		Atu3027	0.27	-0.5
22,702	+		Atu3027	0.38	-0.2
22,702	+		Atu3027	0.38	-0.2
22,710	-		Atu3027	0.39	+0.9
22,710	-		Atu3027	0.39	-0.2
22,710	-		Atu3027	0.39	-1.4
22,710	-		Atu3027	0.39	-1.4
22,751	+		Atu3027	0.43	-0.5
22,756	+		Atu3027	0.43	+1.0
22,764	-		Atu3027	0.44	-0.5
22,845	+		Atu3027	0.52	-0.5
22,939	+		Atu3027	0.62	-2.6
22,957	-		Atu3027	0.63	-1.0
22,993	-		Atu3027	0.67	-1.2
23,167	+		Atu3027	0.85	-0.4
23,167	+		Atu3027	0.85	-0.5
23,175	-		Atu3027	0.85	-0.9
23,175	-		Atu3027	0.85	-0.5
23,197	-		Atu3027	0.88	-0.6
23,201	+		Atu3027	0.88	-0.2
23,286	-				-0.1
23,344	+				-0.5
23,354	+				-0.2
23,362	-				-1.1
23,362	-				-0.9
23,384	+				-0.1
23,438	+		Atu3028	0.15	-0.5
23,445	+		Atu3028	0.16	+0.0
23,527	+		Atu3028	0.26	-1.3
23,574	+		Atu3028	0.32	+1.1
23,576	-		Atu3028	0.32	-1.1
23,591	+		Atu3028	0.34	-1.3
23,594	+		Atu3028	0.35	+1.1
23,602	-		Atu3028	0.36	+0.1
23,682	+		Atu3028	0.46	+0.6
23,690	-		Atu3028	0.47	-0.4
23,690	-		Atu3028	0.47	-1.9
23,699	+		Atu3028	0.48	-0.4
23,711	+		Atu3028	0.49	-0.3
23,719	-		Atu3028	0.50	-1.4
23,789	+		Atu3028	0.59	+0.1
23,793	+		Atu3028	0.60	-1.4
23,793	+		Atu3028	0.60	-0.3
23,829	-		Atu3028	0.64	-0.6
23,832	-		Atu3028	0.65	-1.6
23,934	+		Atu3028	0.77	-1.6
24,072	+				-0.5
24,080	-				+0.4
24,080	-				-0.4
24,080	-				-0.7
24,087	-				-0.5
24,106	+				-0.1
24,154	+				+0.1
24,158	-				-0.0
24,165	+				+0.1
24,175	+				-0.0
24,189	-				-0.5
24,206	-				+0.4
24,233	+				+0.1
24,252	-		Atu3029	0.11	-0.5
24,282	+		Atu3029	0.13	+1.1
24,283	-		Atu3029	0.14	+0.1