Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06050 and BWI76_RS06055 are separated by 84 nucleotides BWI76_RS06055 and BWI76_RS06060 overlap by 1 nucleotides BWI76_RS06060 and BWI76_RS06065 are separated by 252 nucleotides
BWI76_RS06050: BWI76_RS06050 - MFS transporter family glucose-6-phosphate receptor UhpC, at 1,271,089 to 1,272,390
_RS06050
BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016
_RS06055
BWI76_RS06060: BWI76_RS06060 - DNA-binding response regulator, at 1,274,016 to 1,274,645
_RS06060
BWI76_RS06065: BWI76_RS06065 - taurine ABC transporter substrate-binding protein, at 1,274,898 to 1,275,860
_RS06065
Position (kb)
1272
1273
1274
1275 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1271.579 kb on + strand, within BWI76_RS06050 at 1271.579 kb on - strand, within BWI76_RS06050 at 1271.608 kb on - strand, within BWI76_RS06050 at 1271.804 kb on + strand, within BWI76_RS06050 at 1271.951 kb on - strand at 1271.990 kb on - strand, within BWI76_RS06050 at 1272.008 kb on + strand, within BWI76_RS06050 at 1272.205 kb on - strand, within BWI76_RS06050 at 1272.238 kb on - strand, within BWI76_RS06050 at 1272.456 kb on + strand at 1272.544 kb on + strand at 1272.563 kb on + strand at 1272.642 kb on + strand, within BWI76_RS06055 at 1272.666 kb on + strand, within BWI76_RS06055 at 1272.721 kb on + strand, within BWI76_RS06055 at 1273.045 kb on + strand, within BWI76_RS06055 at 1273.642 kb on - strand, within BWI76_RS06055 at 1273.658 kb on + strand, within BWI76_RS06055 at 1273.659 kb on - strand, within BWI76_RS06055 at 1273.719 kb on - strand, within BWI76_RS06055 at 1273.961 kb on + strand at 1274.161 kb on - strand, within BWI76_RS06060 at 1274.461 kb on - strand, within BWI76_RS06060 at 1274.487 kb on - strand, within BWI76_RS06060 at 1274.529 kb on + strand, within BWI76_RS06060 at 1274.550 kb on - strand, within BWI76_RS06060 at 1274.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 1,271,579 + BWI76_RS06050 0.38 +0.7 1,271,579 - BWI76_RS06050 0.38 +0.7 1,271,608 - BWI76_RS06050 0.40 +3.1 1,271,804 + BWI76_RS06050 0.55 +0.4 1,271,951 - -0.7 1,271,990 - BWI76_RS06050 0.69 -1.4 1,272,008 + BWI76_RS06050 0.71 +0.4 1,272,205 - BWI76_RS06050 0.86 -2.6 1,272,238 - BWI76_RS06050 0.88 -2.1 1,272,456 + +0.6 1,272,544 + +0.9 1,272,563 + +0.1 1,272,642 + BWI76_RS06055 0.11 +0.6 1,272,666 + BWI76_RS06055 0.12 +2.3 1,272,721 + BWI76_RS06055 0.16 -1.4 1,273,045 + BWI76_RS06055 0.37 +0.4 1,273,642 - BWI76_RS06055 0.76 +1.4 1,273,658 + BWI76_RS06055 0.77 +1.1 1,273,659 - BWI76_RS06055 0.77 +0.9 1,273,719 - BWI76_RS06055 0.81 -0.1 1,273,961 + -0.7 1,274,161 - BWI76_RS06060 0.23 -0.6 1,274,461 - BWI76_RS06060 0.71 +0.2 1,274,487 - BWI76_RS06060 0.75 +0.8 1,274,529 + BWI76_RS06060 0.81 -3.2 1,274,550 - BWI76_RS06060 0.85 +1.5 1,274,990 - -0.7
Or see this region's nucleotide sequence