Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22385

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,380,163	+		ABZR87_RS22380	0.41	-0.5
1,380,163	+		ABZR87_RS22380	0.41	-0.7
1,380,164	-		ABZR87_RS22380	0.41	-0.3
1,380,164	-		ABZR87_RS22380	0.41	+0.2
1,380,164	-		ABZR87_RS22380	0.41	+0.4
1,380,164	-		ABZR87_RS22380	0.41	-0.9
1,380,197	-		ABZR87_RS22380	0.43	+0.2
1,380,343	+		ABZR87_RS22380	0.52	+0.5
1,380,343	+		ABZR87_RS22380	0.52	+0.4
1,380,343	+		ABZR87_RS22380	0.52	+0.7
1,380,343	+		ABZR87_RS22380	0.52	-0.4
1,380,344	-		ABZR87_RS22380	0.52	-0.0
1,380,344	-		ABZR87_RS22380	0.52	+0.1
1,380,344	-		ABZR87_RS22380	0.52	-0.3
1,380,360	+		ABZR87_RS22380	0.53	-0.4
1,380,360	+		ABZR87_RS22380	0.53	+0.2
1,380,361	-		ABZR87_RS22380	0.53	+2.0
1,380,618	+		ABZR87_RS22380	0.69	-2.4
1,380,618	+		ABZR87_RS22380	0.69	+0.3
1,380,619	-		ABZR87_RS22380	0.69	-1.5
1,380,643	+		ABZR87_RS22380	0.70	-0.6
1,380,644	-		ABZR87_RS22380	0.70	+0.0
1,380,644	-		ABZR87_RS22380	0.70	+0.0
1,380,957	+		ABZR87_RS22380	0.90	+0.1
1,380,958	-		ABZR87_RS22380	0.90	-0.8
1,381,078	+				+0.0
1,381,078	+				-0.1
1,381,091	-				+1.8
1,381,344	+				-0.4
1,381,345	-				-1.5
1,381,345	-				-0.9
1,381,473	+		ABZR87_RS22385	0.13	-0.8
1,381,473	+		ABZR87_RS22385	0.13	+0.2
1,381,474	-		ABZR87_RS22385	0.13	-1.9
1,381,843	+		ABZR87_RS22385	0.29	-2.9
1,381,843	+		ABZR87_RS22385	0.29	-1.9
1,381,843	+		ABZR87_RS22385	0.29	-0.2
1,381,844	-		ABZR87_RS22385	0.29	-1.9
1,381,844	-		ABZR87_RS22385	0.29	-0.7
1,382,156	+		ABZR87_RS22385	0.42	+0.4
1,382,156	+		ABZR87_RS22385	0.42	-2.0
1,382,157	-		ABZR87_RS22385	0.42	-1.9
1,382,157	-		ABZR87_RS22385	0.42	-1.0
1,382,200	+		ABZR87_RS22385	0.44	-0.0
1,382,280	-		ABZR87_RS22385	0.47	-0.8
1,382,280	-		ABZR87_RS22385	0.47	-0.9
1,382,280	-		ABZR87_RS22385	0.47	-0.9
1,382,363	+		ABZR87_RS22385	0.51	-0.9
1,382,363	+		ABZR87_RS22385	0.51	-2.6
1,382,364	-		ABZR87_RS22385	0.51	-0.6
1,382,364	-		ABZR87_RS22385	0.51	+0.4
1,382,364	-		ABZR87_RS22385	0.51	-2.1
1,382,954	-		ABZR87_RS22385	0.75	-0.7
1,383,671	+		ABZR87_RS22390	0.14	-0.6
1,383,671	+		ABZR87_RS22390	0.14	-0.2
1,383,671	+		ABZR87_RS22390	0.14	+1.0
1,383,671	+		ABZR87_RS22390	0.14	+0.5
1,383,671	+		ABZR87_RS22390	0.14	-0.3
1,383,672	-		ABZR87_RS22390	0.14	+1.3
1,383,672	-		ABZR87_RS22390	0.14	-1.0
1,383,672	-		ABZR87_RS22390	0.14	+0.4
1,384,170	-				-0.3
1,384,249	+				-0.8
1,384,249	+				+1.0
1,384,280	+				-2.7
1,384,280	+				-0.5
1,384,281	-				+0.5