Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21045

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,104,131	+		ABZR87_RS21035	0.34	+0.6
1,104,131	+		ABZR87_RS21035	0.34	+0.4
1,104,131	+		ABZR87_RS21035	0.34	-0.4
1,104,132	-		ABZR87_RS21035	0.34	+1.2
1,104,132	-		ABZR87_RS21035	0.34	+1.1
1,104,132	-		ABZR87_RS21035	0.34	+0.7
1,104,132	-		ABZR87_RS21035	0.34	+0.7
1,104,152	+		ABZR87_RS21035	0.38	+0.1
1,104,153	-		ABZR87_RS21035	0.38	+0.9
1,104,153	-		ABZR87_RS21035	0.38	-2.1
1,104,266	+		ABZR87_RS21035	0.56	-0.7
1,104,266	+		ABZR87_RS21035	0.56	-0.7
1,104,266	+		ABZR87_RS21035	0.56	+1.0
1,104,267	-		ABZR87_RS21035	0.56	-0.5
1,104,267	-		ABZR87_RS21035	0.56	-0.3
1,104,267	-		ABZR87_RS21035	0.56	-0.8
1,104,267	-		ABZR87_RS21035	0.56	-0.0
1,104,267	-		ABZR87_RS21035	0.56	-0.8
1,104,312	-		ABZR87_RS21035	0.63	-1.0
1,104,342	-		ABZR87_RS21035	0.68	-0.7
1,104,362	+		ABZR87_RS21035	0.71	-0.5
1,104,362	+		ABZR87_RS21035	0.71	-0.4
1,104,362	+		ABZR87_RS21035	0.71	+1.0
1,104,362	+		ABZR87_RS21035	0.71	-0.6
1,104,362	+		ABZR87_RS21035	0.71	+0.1
1,104,362	+		ABZR87_RS21035	0.71	-0.2
1,104,362	+		ABZR87_RS21035	0.71	+0.6
1,104,363	-		ABZR87_RS21035	0.71	-1.2
1,104,363	-		ABZR87_RS21035	0.71	-0.6
1,104,377	+		ABZR87_RS21035	0.73	-0.7
1,104,378	-		ABZR87_RS21035	0.73	+1.0
1,104,559	+				-0.7
1,104,560	-				+1.4
1,104,750	-		ABZR87_RS21040	0.40	+0.3
1,105,004	+		ABZR87_RS21040	0.88	+0.8
1,105,068	-				-1.0
1,105,101	-				-1.0
1,105,101	-				-0.5
1,105,134	-				+1.0
1,105,160	+				-0.1
1,105,160	+				+0.4
1,105,160	+				-0.2
1,105,208	+		ABZR87_RS21045	0.12	+0.2
1,105,286	+		ABZR87_RS21045	0.19	-0.2
1,105,385	+		ABZR87_RS21045	0.28	-0.6
1,105,386	-		ABZR87_RS21045	0.28	-0.2
1,105,514	+		ABZR87_RS21045	0.39	+1.0
1,105,514	+		ABZR87_RS21045	0.39	-1.5
1,105,515	-		ABZR87_RS21045	0.39	-0.5
1,105,802	+		ABZR87_RS21045	0.65	-1.5
1,105,857	-		ABZR87_RS21045	0.70	-1.3
1,105,871	+		ABZR87_RS21045	0.72	-0.2
1,105,922	+		ABZR87_RS21045	0.76	-0.2
1,106,200	+				-1.2
1,106,201	-				+0.4
1,106,201	-				+0.8
1,106,201	-				-0.4
1,106,209	+				+1.0
1,106,238	+				-0.3
1,106,238	+				+0.4
1,106,239	-				+0.4
1,106,257	+				-0.5
1,106,257	+				-0.8
1,106,257	+				-2.3
1,106,266	+				-0.2
1,106,267	-				-0.3
1,106,267	-				+1.1
1,106,288	+				-0.2
1,106,288	+				-0.3
1,106,398	+		ABZR87_RS21050	0.24	-0.4
1,106,398	+		ABZR87_RS21050	0.24	+1.0
1,106,399	-		ABZR87_RS21050	0.24	-0.2
1,106,399	-		ABZR87_RS21050	0.24	+0.7
1,106,428	+		ABZR87_RS21050	0.28	+0.2