Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15440

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,247,585	+				-1.1
3,247,585	+				+0.2
3,247,586	-				+0.8
3,247,586	-				-0.9
3,247,595	+				-0.5
3,247,595	+				+0.5
3,247,596	-				+0.6
3,247,596	-				+0.1
3,247,596	-				-0.7
3,247,596	-				+0.1
3,247,629	+				-0.2
3,247,630	-				-2.0
3,247,630	-				+0.2
3,247,765	-		ABZR87_RS15435	0.27	-0.3
3,247,765	-		ABZR87_RS15435	0.27	-0.0
3,247,864	+		ABZR87_RS15435	0.43	-0.1
3,247,865	-		ABZR87_RS15435	0.43	+0.1
3,247,865	-		ABZR87_RS15435	0.43	+0.5
3,248,058	+		ABZR87_RS15435	0.74	-1.2
3,248,058	+		ABZR87_RS15435	0.74	-0.2
3,248,058	+		ABZR87_RS15435	0.74	+0.3
3,248,059	-		ABZR87_RS15435	0.74	+0.6
3,248,135	+		ABZR87_RS15435	0.86	-0.3
3,248,135	+		ABZR87_RS15435	0.86	+0.1
3,248,136	-		ABZR87_RS15435	0.87	-0.5
3,248,148	+		ABZR87_RS15435	0.88	-0.8
3,248,149	-		ABZR87_RS15435	0.89	+0.1
3,248,167	+				+0.3
3,248,167	+				+0.4
3,248,167	+				+1.0
3,248,218	-				-0.4
3,248,296	-				-0.3
3,248,296	-				+0.3
3,248,296	-				-0.3
3,248,307	+				+0.4
3,248,308	-				-0.3
3,248,338	+				+0.1
3,248,338	+				+1.4
3,248,339	-				+1.2
3,248,371	-				-1.9
3,248,470	+				+1.9
3,248,470	+				+0.5
3,248,470	+				-0.7
3,248,731	+		ABZR87_RS15440	0.26	-0.1
3,248,731	+		ABZR87_RS15440	0.26	-1.3
3,248,732	-		ABZR87_RS15440	0.26	+0.3
3,248,732	-		ABZR87_RS15440	0.26	-0.4
3,248,906	-		ABZR87_RS15440	0.38	+0.3
3,248,972	-		ABZR87_RS15440	0.43	-0.4
3,249,121	+		ABZR87_RS15440	0.53	-0.7
3,249,121	+		ABZR87_RS15440	0.53	-1.4
3,249,121	+		ABZR87_RS15440	0.53	+0.3
3,249,151	+		ABZR87_RS15440	0.55	-1.6
3,249,152	-		ABZR87_RS15440	0.55	-1.6
3,249,214	+		ABZR87_RS15440	0.59	+0.3
3,249,272	-		ABZR87_RS15440	0.63	-0.6
3,249,796	+				-0.9
3,249,815	-				+0.3
3,249,815	-				+0.2
3,249,947	+				-0.0
3,249,948	-				-1.0
3,249,948	-				+0.6
3,250,104	+		ABZR87_RS15445	0.19	-0.5
3,250,104	+		ABZR87_RS15445	0.19	-0.1
3,250,104	+		ABZR87_RS15445	0.19	-0.1
3,250,104	+		ABZR87_RS15445	0.19	+0.4
3,250,105	-		ABZR87_RS15445	0.19	-0.5
3,250,119	+		ABZR87_RS15445	0.20	-0.7
3,250,120	-		ABZR87_RS15445	0.20	+0.3
3,250,120	-		ABZR87_RS15445	0.20	-0.7
3,250,120	-		ABZR87_RS15445	0.20	-0.6
3,250,120	-		ABZR87_RS15445	0.20	-0.1
3,250,327	-		ABZR87_RS15445	0.35	+0.1
3,250,355	+		ABZR87_RS15445	0.37	+0.3
3,250,355	+		ABZR87_RS15445	0.37	-0.1
3,250,355	+		ABZR87_RS15445	0.37	-0.4
3,250,407	+		ABZR87_RS15445	0.41	-2.0
3,250,408	-		ABZR87_RS15445	0.41	-0.4
3,250,408	-		ABZR87_RS15445	0.41	+1.4
3,250,704	+		ABZR87_RS15445	0.62	+0.8
3,250,705	-		ABZR87_RS15445	0.62	-0.7