Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10400

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
2,202,404	+		ABZR87_RS10395	0.45	+0.1
2,202,404	+		ABZR87_RS10395	0.45	-0.6
2,202,539	-		ABZR87_RS10395	0.53	+0.7
2,202,743	+		ABZR87_RS10395	0.65	-0.5
2,202,743	+		ABZR87_RS10395	0.65	-0.5
2,202,744	-		ABZR87_RS10395	0.65	+0.2
2,202,744	-		ABZR87_RS10395	0.65	+0.3
2,202,744	-		ABZR87_RS10395	0.65	-1.3
2,202,744	-		ABZR87_RS10395	0.65	-1.2
2,202,873	+		ABZR87_RS10395	0.73	+0.2
2,202,996	-		ABZR87_RS10395	0.80	-2.0
2,203,019	+		ABZR87_RS10395	0.82	-0.2
2,203,019	+		ABZR87_RS10395	0.82	+0.1
2,203,020	-		ABZR87_RS10395	0.82	-0.0
2,203,020	-		ABZR87_RS10395	0.82	-0.7
2,203,020	-		ABZR87_RS10395	0.82	+0.9
2,203,020	-		ABZR87_RS10395	0.82	-1.1
2,203,020	-		ABZR87_RS10395	0.82	+2.4
2,203,060	+		ABZR87_RS10395	0.84	-2.1
2,203,091	+		ABZR87_RS10395	0.86	-0.0
2,203,143	-		ABZR87_RS10395	0.89	-0.2
2,203,618	-		ABZR87_RS10400	0.24	-1.0
2,203,721	+		ABZR87_RS10400	0.34	-0.8
2,203,722	-		ABZR87_RS10400	0.34	-1.1
2,203,863	+		ABZR87_RS10400	0.47	-0.8
2,203,864	-		ABZR87_RS10400	0.47	+0.7
2,204,004	+		ABZR87_RS10400	0.60	+2.0
2,204,005	-		ABZR87_RS10400	0.60	+0.8
2,204,217	+		ABZR87_RS10400	0.79	-0.3
2,204,295	+		ABZR87_RS10400	0.86	-0.8
2,204,296	-		ABZR87_RS10400	0.86	-0.6
2,204,457	+				+0.3
2,204,457	+				+0.8
2,204,457	+				+0.5
2,204,458	-				-0.3
2,204,458	-				+0.9