Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09465

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
2,009,479	+				+1.9
2,009,479	+				+1.3
2,009,480	-				-0.0
2,009,480	-				-1.9
2,009,943	+		ABZR87_RS09460	0.47	+0.3
2,010,276	+		ABZR87_RS09460	0.83	+0.7
2,010,276	+		ABZR87_RS09460	0.83	+0.1
2,010,276	+		ABZR87_RS09460	0.83	+0.2
2,010,276	+		ABZR87_RS09460	0.83	-0.6
2,010,276	+		ABZR87_RS09460	0.83	+1.0
2,010,869	+		ABZR87_RS09465	0.32	-0.6
2,011,055	+		ABZR87_RS09465	0.46	-0.5
2,011,055	+		ABZR87_RS09465	0.46	-0.4
2,011,055	+		ABZR87_RS09465	0.46	-1.2
2,011,055	+		ABZR87_RS09465	0.46	-0.8
2,011,148	+		ABZR87_RS09465	0.53	+0.6
2,011,148	+		ABZR87_RS09465	0.53	+0.4
2,011,199	+		ABZR87_RS09465	0.57	+0.8
2,011,236	+		ABZR87_RS09465	0.60	-0.5
2,011,236	+		ABZR87_RS09465	0.60	-2.5
2,011,565	+		ABZR87_RS09465	0.85	-3.4
2,011,565	+		ABZR87_RS09465	0.85	-1.9
2,011,565	+		ABZR87_RS09465	0.85	-0.9
2,011,566	-		ABZR87_RS09465	0.85	+0.7
2,011,622	+		ABZR87_RS09465	0.90	-1.8
2,011,622	+		ABZR87_RS09465	0.90	-1.3
2,011,622	+		ABZR87_RS09465	0.90	-0.8
2,011,622	+		ABZR87_RS09465	0.90	-3.9
2,011,622	+		ABZR87_RS09465	0.90	-2.7
2,011,622	+		ABZR87_RS09465	0.90	+0.4
2,011,622	+		ABZR87_RS09465	0.90	-0.4
2,011,622	+		ABZR87_RS09465	0.90	-1.5
2,011,636	+				-0.4
2,011,636	+				-0.2
2,011,637	-				+0.9
2,011,724	+				-0.1
2,011,724	+				+1.6