Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07805

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,654,569	+				+0.0
1,654,570	-				-0.6
1,654,570	-				-0.2
1,654,623	+				-0.5
1,654,746	-		ABZR87_RS07800	0.14	+0.2
1,654,770	+		ABZR87_RS07800	0.16	+0.8
1,654,770	+		ABZR87_RS07800	0.16	+0.3
1,654,770	+		ABZR87_RS07800	0.16	-0.7
1,654,771	-		ABZR87_RS07800	0.16	+0.0
1,654,771	-		ABZR87_RS07800	0.16	+1.1
1,654,791	+		ABZR87_RS07800	0.18	-0.2
1,654,791	+		ABZR87_RS07800	0.18	-1.4
1,654,791	+		ABZR87_RS07800	0.18	-0.3
1,654,791	+		ABZR87_RS07800	0.18	+0.5
1,654,792	-		ABZR87_RS07800	0.19	+1.1
1,654,792	-		ABZR87_RS07800	0.19	-0.7
1,655,046	+		ABZR87_RS07800	0.46	+0.1
1,655,046	+		ABZR87_RS07800	0.46	-0.0
1,655,046	+		ABZR87_RS07800	0.46	-0.5
1,655,046	+		ABZR87_RS07800	0.46	-0.3
1,655,046	+		ABZR87_RS07800	0.46	-0.8
1,655,047	-		ABZR87_RS07800	0.46	-0.6
1,655,047	-		ABZR87_RS07800	0.46	-0.1
1,655,047	-		ABZR87_RS07800	0.46	+0.5
1,655,076	+		ABZR87_RS07800	0.49	-0.6
1,655,076	+		ABZR87_RS07800	0.49	+0.3
1,655,125	-		ABZR87_RS07800	0.55	-0.3
1,655,125	-		ABZR87_RS07800	0.55	+1.4
1,655,223	+		ABZR87_RS07800	0.65	-1.2
1,655,223	+		ABZR87_RS07800	0.65	-1.6
1,655,224	-		ABZR87_RS07800	0.66	-0.1
1,655,527	+				-0.7
1,655,539	+				+0.4
1,655,540	-				-0.3
1,655,562	-				+0.4
1,655,562	-				+0.7
1,655,690	+				+0.1
1,655,764	-		ABZR87_RS07805	0.12	-0.7
1,655,921	+		ABZR87_RS07805	0.21	-0.9
1,655,922	-		ABZR87_RS07805	0.21	-0.5
1,656,140	+		ABZR87_RS07805	0.33	-1.5
1,656,195	-		ABZR87_RS07805	0.36	-2.0
1,656,427	-		ABZR87_RS07805	0.50	+0.2
1,656,485	+		ABZR87_RS07805	0.53	-0.1
1,656,626	+		ABZR87_RS07805	0.61	-1.6
1,656,627	-		ABZR87_RS07805	0.61	-1.0
1,656,627	-		ABZR87_RS07805	0.61	+0.9
1,656,951	-		ABZR87_RS07805	0.80	-0.9
1,656,951	-		ABZR87_RS07805	0.80	-0.4
1,657,119	-		ABZR87_RS07805	0.90	-2.3
1,657,119	-		ABZR87_RS07805	0.90	-0.8
1,657,145	+				-0.2
1,657,163	+				-0.1
1,657,206	-				-0.6
1,657,244	+				-0.7
1,657,244	+				+0.3
1,657,245	-				-0.7
1,657,278	+				-0.8
1,657,338	-				-1.4
1,657,338	-				+0.5
1,657,564	+		ABZR87_RS07810	0.13	-0.1
1,657,565	-		ABZR87_RS07810	0.13	+0.5
1,657,565	-		ABZR87_RS07810	0.13	+0.3
1,657,565	-		ABZR87_RS07810	0.13	+0.5
1,657,629	-		ABZR87_RS07810	0.18	+0.1
1,657,629	-		ABZR87_RS07810	0.18	+0.0
1,657,694	+		ABZR87_RS07810	0.23	+0.7
1,657,694	+		ABZR87_RS07810	0.23	-0.4
1,657,695	-		ABZR87_RS07810	0.23	+0.3
1,657,695	-		ABZR87_RS07810	0.23	+0.1
1,657,698	-		ABZR87_RS07810	0.24	+0.7
1,657,751	+		ABZR87_RS07810	0.28	-0.6
1,657,751	+		ABZR87_RS07810	0.28	-2.3
1,657,835	+		ABZR87_RS07810	0.34	-0.2
1,657,836	-		ABZR87_RS07810	0.34	-0.9
1,657,836	-		ABZR87_RS07810	0.34	-1.0
1,657,836	-		ABZR87_RS07810	0.34	-0.8
1,657,836	-		ABZR87_RS07810	0.34	-0.0
1,657,836	-		ABZR87_RS07810	0.34	-0.0
1,658,069	+		ABZR87_RS07810	0.52	+0.8