Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07675

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,626,614	+		ABZR87_RS07670	0.57	-0.1
1,626,671	+		ABZR87_RS07670	0.60	+0.9
1,626,671	+		ABZR87_RS07670	0.60	+1.8
1,626,701	+		ABZR87_RS07670	0.61	+0.2
1,626,702	-		ABZR87_RS07670	0.61	-0.3
1,626,705	+		ABZR87_RS07670	0.61	+0.4
1,626,735	+		ABZR87_RS07670	0.63	+0.8
1,626,735	+		ABZR87_RS07670	0.63	-0.0
1,626,735	+		ABZR87_RS07670	0.63	-0.2
1,626,735	+		ABZR87_RS07670	0.63	-0.1
1,626,735	+		ABZR87_RS07670	0.63	+0.2
1,626,735	+		ABZR87_RS07670	0.63	+0.0
1,626,736	-		ABZR87_RS07670	0.63	+0.1
1,626,736	-		ABZR87_RS07670	0.63	+0.0
1,626,736	-		ABZR87_RS07670	0.63	-0.9
1,626,736	-		ABZR87_RS07670	0.63	+1.0
1,626,736	-		ABZR87_RS07670	0.63	-0.5
1,626,736	-		ABZR87_RS07670	0.63	+0.1
1,626,736	-		ABZR87_RS07670	0.63	-0.1
1,626,736	-		ABZR87_RS07670	0.63	+0.3
1,626,736	-		ABZR87_RS07670	0.63	-0.3
1,626,803	+		ABZR87_RS07670	0.66	+0.4
1,626,804	-		ABZR87_RS07670	0.66	-0.1
1,626,804	-		ABZR87_RS07670	0.66	+0.4
1,626,804	-		ABZR87_RS07670	0.66	+0.1
1,627,245	-		ABZR87_RS07670	0.88	+0.8
1,627,448	+				-0.1
1,627,449	-				-0.8
1,627,449	-				-0.3
1,627,499	+				+0.9
1,627,500	-				+0.4
1,627,592	+		ABZR87_RS07675	0.12	-0.8
1,627,621	+		ABZR87_RS07675	0.17	-1.8
1,627,621	+		ABZR87_RS07675	0.17	-1.0
1,627,621	+		ABZR87_RS07675	0.17	-1.2
1,627,621	+		ABZR87_RS07675	0.17	-0.4
1,627,622	-		ABZR87_RS07675	0.17	-0.2
1,627,681	+		ABZR87_RS07675	0.25	-0.6
1,627,682	-		ABZR87_RS07675	0.25	-0.6
1,627,682	-		ABZR87_RS07675	0.25	+0.2
1,627,771	+		ABZR87_RS07675	0.38	+0.4
1,627,771	+		ABZR87_RS07675	0.38	+0.8
1,627,772	-		ABZR87_RS07675	0.38	-1.6
1,627,856	-		ABZR87_RS07675	0.51	+0.2
1,627,856	-		ABZR87_RS07675	0.51	+0.1
1,627,861	+		ABZR87_RS07675	0.51	-1.3
1,627,862	-		ABZR87_RS07675	0.51	-0.7
1,627,862	-		ABZR87_RS07675	0.51	-0.4
1,627,896	+		ABZR87_RS07675	0.56	-1.8
1,627,896	+		ABZR87_RS07675	0.56	-2.0
1,627,896	+		ABZR87_RS07675	0.56	-0.1
1,627,896	+		ABZR87_RS07675	0.56	-1.1
1,627,897	-		ABZR87_RS07675	0.56	-1.0
1,627,897	-		ABZR87_RS07675	0.56	-0.8
1,627,897	-		ABZR87_RS07675	0.56	-2.7
1,627,897	-		ABZR87_RS07675	0.56	-0.2
1,627,981	+		ABZR87_RS07675	0.69	-0.2
1,627,981	+		ABZR87_RS07675	0.69	-0.1
1,627,982	-		ABZR87_RS07675	0.69	-1.5
1,628,416	-		ABZR87_RS07680	0.61	+0.1
1,628,416	-		ABZR87_RS07680	0.61	+0.1
1,628,416	-		ABZR87_RS07680	0.61	-0.2
1,628,416	-		ABZR87_RS07680	0.61	+0.8
1,628,416	-		ABZR87_RS07680	0.61	+0.2
1,628,490	+		ABZR87_RS07680	0.84	-0.4
1,628,490	+		ABZR87_RS07680	0.84	-0.9
1,628,491	-		ABZR87_RS07680	0.84	+0.0
1,628,491	-		ABZR87_RS07680	0.84	-0.7
1,628,855	+		ABZR87_RS07685	0.43	+0.2
1,628,856	-		ABZR87_RS07685	0.43	+0.4
1,628,856	-		ABZR87_RS07685	0.43	-0.4
1,628,856	-		ABZR87_RS07685	0.43	-0.6
1,628,856	-		ABZR87_RS07685	0.43	-1.7
1,628,856	-		ABZR87_RS07685	0.43	-0.8
1,628,856	-		ABZR87_RS07685	0.43	-0.0
1,628,856	-		ABZR87_RS07685	0.43	-0.9
1,628,858	-		ABZR87_RS07685	0.44	-0.8
1,628,868	-		ABZR87_RS07685	0.45	-0.3
1,628,868	-		ABZR87_RS07685	0.45	-1.6
1,628,945	+		ABZR87_RS07685	0.56	-0.6
1,628,945	+		ABZR87_RS07685	0.56	-0.4
1,628,946	-		ABZR87_RS07685	0.56	-0.2
1,629,008	+		ABZR87_RS07685	0.64	-0.3
1,629,179	+		ABZR87_RS07685	0.88	-0.7
1,629,179	+		ABZR87_RS07685	0.88	-0.0
1,629,179	+		ABZR87_RS07685	0.88	-2.5
1,629,180	-		ABZR87_RS07685	0.88	+0.2
1,629,180	-		ABZR87_RS07685	0.88	-0.8