Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05140

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,081,193	+				+0.2
1,081,193	+				-0.4
1,081,193	+				-0.2
1,081,193	+				+0.4
1,081,193	+				+1.0
1,081,193	+				+0.9
1,081,194	-				+1.0
1,081,194	-				+0.2
1,081,292	+				-1.7
1,081,292	+				+0.9
1,081,292	+				-0.3
1,081,292	+				+0.1
1,081,292	+				-0.1
1,081,292	+				-0.4
1,081,292	+				-1.4
1,081,292	+				-0.8
1,081,292	+				-0.7
1,081,292	+				-0.0
1,081,293	-				+0.2
1,081,293	-				-1.7
1,081,293	-				-0.7
1,081,438	-		ABZR87_RS05130	0.71	-1.3
1,081,510	+				+0.6
1,081,510	+				+0.2
1,081,510	+				-0.6
1,081,511	-				+0.8
1,081,511	-				-0.5
1,081,511	-				-0.3
1,081,511	-				+0.9
1,081,531	+				+0.1
1,081,531	+				-0.2
1,081,532	-				+0.6
1,081,532	-				+1.6
1,081,532	-				-0.5
1,081,532	-				+0.2
1,081,532	-				+0.1
1,081,532	-				+2.6
1,081,809	-		ABZR87_RS05135	0.48	-0.4
1,082,126	+				-0.4
1,082,157	+				+0.1
1,082,157	+				-0.2
1,082,158	-				-0.0
1,082,158	-				+0.6
1,082,158	-				-0.1
1,082,310	+		ABZR87_RS05140	0.11	-0.4
1,082,483	+		ABZR87_RS05140	0.24	-0.4
1,083,076	-		ABZR87_RS05140	0.68	-0.7
1,083,097	-		ABZR87_RS05140	0.70	+0.6
1,083,272	-		ABZR87_RS05140	0.83	-0.0
1,083,452	+				-0.6
1,083,452	+				-0.5
1,083,453	-				-0.7
1,083,453	-				+0.6
1,083,515	+				-0.2
1,083,515	+				-0.2
1,083,516	-				-0.1
1,083,584	+				+0.1
1,083,584	+				+0.1
1,083,584	+				+0.0
1,083,584	+				+0.3
1,083,584	+				-1.5
1,083,585	-				+1.4
1,083,585	-				-0.2
1,083,585	-				-0.8
1,083,608	+				-0.4
1,083,609	-				+0.1
1,083,963	+		ABZR87_RS05145	0.64	-0.9
1,084,174	+				-0.6
1,084,174	+				+0.2
1,084,174	+				-1.7
1,084,174	+				-0.7
1,084,174	+				-0.7
1,084,174	+				+0.2
1,084,175	-				-0.3
1,084,175	-				-1.2
1,084,175	-				-0.1
1,084,175	-				-0.0
1,084,175	-				-0.5
1,084,175	-				-0.9
1,084,175	-				+2.3
1,084,175	-				-0.5
1,084,175	-				-0.5
1,084,175	-				+0.8
1,084,175	-				-0.4
1,084,194	+				-0.2
1,084,195	-				-1.0
1,084,195	-				-0.7
1,084,195	-				-0.4