Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14905

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
3,122,188	+		BWI76_RS14900	0.16	-0.6
3,122,196	-		BWI76_RS14900	0.17	+0.0
3,122,348	+		BWI76_RS14900	0.32	+0.4
3,122,640	+		BWI76_RS14900	0.61	-1.1
3,122,681	+		BWI76_RS14900	0.66	-0.2
3,122,810	+		BWI76_RS14900	0.79	-0.7
3,122,818	-		BWI76_RS14900	0.79	-0.5
3,122,873	-		BWI76_RS14900	0.85	-0.3
3,122,883	+		BWI76_RS14900	0.86	-2.4
3,122,891	-		BWI76_RS14900	0.87	+0.8
3,122,927	+				+0.3
3,122,929	-				+1.1
3,122,935	-				+0.0
3,122,940	-				+1.3
3,122,940	-				+1.8
3,122,954	-				+0.1
3,122,964	-				+0.4
3,122,964	-				-0.3
3,123,062	+				+1.2
3,123,062	+				+0.4
3,123,062	+				-0.8
3,123,071	-				+0.7
3,123,076	-				+0.6
3,123,076	-				-3.3
3,123,077	-				-0.7
3,123,083	+				-0.3
3,123,134	-				-0.2
3,123,143	-				-1.3
3,123,193	+				-0.1
3,123,201	-				+0.3
3,123,249	-		BWI76_RS14905	0.11	+1.8
3,123,268	+		BWI76_RS14905	0.12	+1.3
3,123,272	+		BWI76_RS14905	0.13	-1.2
3,123,283	+		BWI76_RS14905	0.14	+1.2
3,123,283	+		BWI76_RS14905	0.14	-1.7
3,123,291	-		BWI76_RS14905	0.14	+0.8
3,123,302	+		BWI76_RS14905	0.15	+1.0
3,123,302	+		BWI76_RS14905	0.15	+3.1
3,123,302	+		BWI76_RS14905	0.15	-1.0
3,123,302	+		BWI76_RS14905	0.15	-0.0
3,123,302	+		BWI76_RS14905	0.15	+0.7
3,123,302	+		BWI76_RS14905	0.15	+1.0
3,123,302	+		BWI76_RS14905	0.15	-0.4
3,123,310	-		BWI76_RS14905	0.16	+0.6
3,123,310	-		BWI76_RS14905	0.16	+0.2
3,123,310	-		BWI76_RS14905	0.16	-0.9
3,123,310	-		BWI76_RS14905	0.16	+0.5
3,123,310	-		BWI76_RS14905	0.16	+1.0
3,123,310	-		BWI76_RS14905	0.16	+0.6
3,123,310	-				+1.3
3,123,310	-		BWI76_RS14905	0.16	-0.3
3,123,310	-				+0.3
3,123,310	-		BWI76_RS14905	0.16	+0.3
3,123,322	+		BWI76_RS14905	0.17	-1.9
3,123,371	+		BWI76_RS14905	0.21	-1.5
3,123,402	-				-0.3
3,123,502	+		BWI76_RS14905	0.31	-1.0
3,123,518	-		BWI76_RS14905	0.32	-0.2
3,123,530	-		BWI76_RS14905	0.33	+1.7
3,123,544	-		BWI76_RS14905	0.34	-0.7
3,123,596	-		BWI76_RS14905	0.38	-0.4
3,123,632	-		BWI76_RS14905	0.41	-0.2
3,123,632	-		BWI76_RS14905	0.41	-1.0
3,123,655	+		BWI76_RS14905	0.43	+1.2
3,123,655	+		BWI76_RS14905	0.43	-1.0
3,123,655	+		BWI76_RS14905	0.43	+1.0
3,123,655	+		BWI76_RS14905	0.43	+0.0
3,123,655	-				-0.3
3,123,660	+		BWI76_RS14905	0.43	+0.8
3,123,689	+		BWI76_RS14905	0.46	-0.9
3,123,780	+		BWI76_RS14905	0.53	-3.6
3,123,780	+		BWI76_RS14905	0.53	-1.9
3,123,780	+				+0.3
3,123,920	-		BWI76_RS14905	0.64	-0.3
3,124,001	+		BWI76_RS14905	0.70	+0.1
3,124,001	+		BWI76_RS14905	0.70	-0.6
3,124,001	+		BWI76_RS14905	0.70	-1.3
3,124,001	+		BWI76_RS14905	0.70	+0.3
3,124,009	-		BWI76_RS14905	0.71	-0.1
3,124,009	-		BWI76_RS14905	0.71	+0.0
3,124,143	-		BWI76_RS14905	0.82	-1.5
3,124,186	+				+2.3
3,124,187	+		BWI76_RS14905	0.85	-0.0
3,124,234	+		BWI76_RS14905	0.89	-1.9
3,124,242	-		BWI76_RS14905	0.90	-0.6
3,124,242	-		BWI76_RS14905	0.90	-0.3
3,124,242	-		BWI76_RS14905	0.90	+0.5
3,124,242	-		BWI76_RS14905	0.90	-1.3
3,124,491	+				+0.3
3,124,514	-				+0.8
3,124,627	-		BWI76_RS14910	0.12	+0.1
3,124,742	+		BWI76_RS14910	0.23	-0.1
3,124,755	-		BWI76_RS14910	0.24	-0.1
3,124,760	-		BWI76_RS14910	0.25	+1.1
3,124,839	-		BWI76_RS14910	0.32	-2.6
3,124,920	+		BWI76_RS14910	0.39	-0.1
3,124,928	-		BWI76_RS14910	0.40	+0.0
3,124,997	+		BWI76_RS14910	0.46	-0.3
3,125,005	-				+0.3
3,125,005	-		BWI76_RS14910	0.47	-2.0
3,125,073	-		BWI76_RS14910	0.53	-0.8