Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12325

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,614,068	+		ABZR87_RS12320	0.17	+1.0
2,614,068	+		ABZR87_RS12320	0.17	-1.1
2,614,069	-		ABZR87_RS12320	0.17	+0.4
2,614,087	-		ABZR87_RS12320	0.18	-0.7
2,614,087	-		ABZR87_RS12320	0.18	+0.0
2,614,317	+		ABZR87_RS12320	0.41	-1.1
2,614,318	-		ABZR87_RS12320	0.41	-1.8
2,614,334	-		ABZR87_RS12320	0.42	+0.0
2,614,498	-		ABZR87_RS12320	0.58	-0.6
2,614,668	+		ABZR87_RS12320	0.75	-1.6
2,614,668	+		ABZR87_RS12320	0.75	-0.3
2,614,668	+		ABZR87_RS12320	0.75	-0.1
2,614,668	+		ABZR87_RS12320	0.75	-0.3
2,614,669	-		ABZR87_RS12320	0.75	+0.4
2,614,696	-		ABZR87_RS12320	0.78	+0.1
2,614,797	+		ABZR87_RS12320	0.87	+0.4
2,614,797	+		ABZR87_RS12320	0.87	+0.3
2,614,798	-		ABZR87_RS12320	0.88	-0.3
2,614,839	+				-0.5
2,614,839	+				+0.5
2,614,840	-				-1.2
2,614,840	-				+0.4
2,614,859	-				-1.0
2,614,876	-				+1.0
2,614,876	-				+0.6
2,614,879	-				-0.4
2,614,879	-				+0.1
2,614,979	-				-0.9
2,614,979	-				+0.2
2,615,054	+		ABZR87_RS12325	0.17	+0.6
2,615,054	+		ABZR87_RS12325	0.17	-0.2
2,615,055	-		ABZR87_RS12325	0.17	+0.4
2,615,055	-		ABZR87_RS12325	0.17	-0.8
2,615,124	-		ABZR87_RS12325	0.26	-0.8
2,615,124	-		ABZR87_RS12325	0.26	-0.2
2,615,145	+		ABZR87_RS12325	0.28	-0.8
2,615,223	-		ABZR87_RS12325	0.38	-0.1
2,615,231	+		ABZR87_RS12325	0.39	-0.4
2,615,232	-		ABZR87_RS12325	0.40	+0.6
2,615,232	-		ABZR87_RS12325	0.40	-0.8
2,615,368	+		ABZR87_RS12325	0.57	-0.0
2,615,368	+		ABZR87_RS12325	0.57	-0.4
2,615,369	-		ABZR87_RS12325	0.57	-0.9
2,615,372	+		ABZR87_RS12325	0.57	-0.9
2,615,373	-		ABZR87_RS12325	0.58	-1.0
2,615,373	-		ABZR87_RS12325	0.58	+0.3
2,615,384	+		ABZR87_RS12325	0.59	-0.2
2,615,385	-		ABZR87_RS12325	0.59	-0.5
2,615,608	-		ABZR87_RS12325	0.88	-0.6
2,615,619	+		ABZR87_RS12325	0.89	-0.3
2,615,619	+		ABZR87_RS12325	0.89	+0.1
2,615,619	+		ABZR87_RS12325	0.89	-0.1
2,615,620	-		ABZR87_RS12325	0.89	-1.4
2,615,620	-		ABZR87_RS12325	0.89	-0.6
2,615,620	-		ABZR87_RS12325	0.89	+1.2
2,615,657	+				+0.4
2,615,657	+				-0.5
2,615,657	+				-0.2
2,615,658	-				+0.1
2,615,658	-				+0.1
2,615,805	-				-0.7
2,615,834	+		ABZR87_RS12330	0.24	-0.6
2,615,834	+		ABZR87_RS12330	0.24	+0.3
2,615,945	+				-0.4
2,615,946	-				+0.2
2,615,986	+				-0.5
2,615,986	+				-0.2
2,615,987	-				-0.3
2,615,987	-				-0.3
2,616,001	+				-0.6
2,616,003	+				+1.1
2,616,003	+				-0.5
2,616,004	-				-1.0
2,616,004	-				-1.3
2,616,004	-				+0.1
2,616,004	-				+0.1
2,616,061	-				-0.4
2,616,072	+				+0.4
2,616,073	-				-0.6
2,616,077	-				-1.0
2,616,077	-				-0.1
2,616,077	-				-0.7
2,616,077	-				-0.2
2,616,249	-				+0.2
2,616,251	-				-0.1
2,616,304	+				+0.2
2,616,304	+				+0.1
2,616,304	+				+1.0
2,616,305	-				-0.3
2,616,350	-				+0.3
2,616,357	-				-1.2
2,616,363	+				-1.2
2,616,363	+				-0.1
2,616,540	+		ABZR87_RS12335	0.13	+0.5