Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00167 and H281DRAFT_00168 overlap by 11 nucleotides H281DRAFT_00168 and H281DRAFT_00169 are separated by 113 nucleotides
H281DRAFT_00167: H281DRAFT_00167 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 180,245 to 181,183
_00167
H281DRAFT_00168: H281DRAFT_00168 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 181,173 to 182,030
_00168
H281DRAFT_00169: H281DRAFT_00169 - carbohydrate ABC transporter ATP-binding protein, CUT1 family, at 182,144 to 183,259
_00169
Position (kb) 181
182
183 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 180.380 kb on + strand, within H281DRAFT_00167 at 180.404 kb on + strand, within H281DRAFT_00167 at 181.181 kb on + strand at 181.182 kb on - strand at 181.182 kb on - strand at 181.237 kb on - strand at 181.237 kb on - strand at 181.254 kb on + strand at 181.255 kb on - strand at 181.638 kb on + strand, within H281DRAFT_00168 at 181.655 kb on + strand, within H281DRAFT_00168 at 181.678 kb on - strand, within H281DRAFT_00168 at 182.171 kb on + strand at 182.405 kb on + strand, within H281DRAFT_00169 at 182.405 kb on + strand, within H281DRAFT_00169 at 182.711 kb on + strand, within H281DRAFT_00169
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 180,380 + H281DRAFT_00167 0.14 -1.1 180,404 + H281DRAFT_00167 0.17 -0.5 181,181 + -0.8 181,182 - -0.6 181,182 - -0.3 181,237 - -0.7 181,237 - -1.4 181,254 + -1.1 181,255 - -1.2 181,638 + H281DRAFT_00168 0.54 -0.9 181,655 + H281DRAFT_00168 0.56 -0.7 181,678 - H281DRAFT_00168 0.59 -1.5 182,171 + -1.3 182,405 + H281DRAFT_00169 0.23 -2.9 182,405 + H281DRAFT_00169 0.23 -1.4 182,711 + H281DRAFT_00169 0.51 -1.3
Or see this region's nucleotide sequence