Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0318
Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 360,486 | - | flgB | DVU0316 | 0.21 | +1.4 |
| 360,525 | - | flgB | DVU0316 | 0.30 | +0.1 |
| 360,650 | + | flgB | DVU0316 | 0.61 | -0.4 |
| 360,652 | - | flgB | DVU0316 | 0.61 | +0.2 |
| 360,834 | + | +0.5 | |||
| 360,979 | + | -0.6 | |||
| 361,005 | + | +1.9 | |||
| 361,011 | + | -0.5 | |||
| 361,013 | - | -0.1 | |||
| 361,135 | + | +1.1 | |||
| 361,145 | + | +1.5 | |||
| 361,210 | + | -0.3 | |||
| 361,218 | - | +0.2 | |||
| 361,416 | + | -1.3 | |||
| 361,417 | + | -1.0 | |||
| 361,497 | - | -0.0 | |||
| 361,718 | - | DVU0318 | 0.48 | +0.9 | |
| 361,771 | - | DVU0318 | 0.57 | +1.8 | |
| 361,891 | + | DVU0318 | 0.78 | +0.6 | |
| 361,950 | - | DVU0318 | 0.89 | +2.5 | |
| 361,998 | - | +1.2 | |||
| 362,000 | - | +0.3 | |||
| 362,145 | + | -1.0 | |||
| 362,146 | + | +1.5 | |||
| 362,167 | + | -0.2 | |||
| 362,169 | - | +0.2 | |||
| 362,248 | + | +0.3 | |||
| 362,256 | - | -0.0 | |||
| 362,385 | + | -0.1 | |||
| 362,385 | + | +1.1 | |||
| 362,461 | - | -0.2 | |||
| 362,466 | + | +0.1 |
Or see this region's nucleotide sequence