Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2229

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,320,534	+		DVU2227	0.54	+0.1
2,320,537	-		DVU2227	0.55	+0.1
2,320,570	+		DVU2227	0.62	-1.3
2,320,588	-		DVU2227	0.66	+0.5
2,320,663	+		DVU2227	0.83	+0.1
2,320,663	+		DVU2227	0.83	-0.2
2,320,673	+		DVU2227	0.86	-0.2
2,320,673	+		DVU2227	0.86	-0.0
2,320,673	+		DVU2227	0.86	-1.9
2,320,673	+		DVU2227	0.86	-0.1
2,320,689	-		DVU2227	0.89	-0.1
2,320,769	+				+0.4
2,320,769	+				+0.0
2,320,800	+				-0.3
2,320,939	-		DVU2228	0.27	-0.4
2,320,954	+		DVU2228	0.29	+0.1
2,321,044	-		DVU2228	0.41	-1.0
2,321,058	+		DVU2228	0.43	+0.4
2,321,093	-		DVU2228	0.48	-0.7
2,321,120	-		DVU2228	0.52	-0.5
2,321,152	+		DVU2228	0.56	-0.0
2,321,228	+		DVU2228	0.66	+0.7
2,321,236	-		DVU2228	0.67	+0.3
2,321,236	-		DVU2228	0.67	-0.5
2,321,529	+				-0.0
2,321,576	-	motA-2	DVU2229	0.15	-1.5
2,321,587	-	motA-2	DVU2229	0.17	+0.7
2,321,604	+	motA-2	DVU2229	0.19	+0.0
2,321,612	-	motA-2	DVU2229	0.20	+1.2
2,321,613	-	motA-2	DVU2229	0.20	+0.8
2,321,663	-	motA-2	DVU2229	0.27	-0.3
2,321,681	+	motA-2	DVU2229	0.29	+1.6
2,321,692	+	motA-2	DVU2229	0.31	-2.1
2,321,901	+	motA-2	DVU2229	0.58	+0.3
2,321,980	+	motA-2	DVU2229	0.68	+0.8
2,321,988	-	motA-2	DVU2229	0.69	+2.0
2,322,002	+	motA-2	DVU2229	0.71	-0.1
2,322,009	+	motA-2	DVU2229	0.72	-2.3
2,322,037	-	motA-2	DVU2229	0.76	+0.4
2,322,051	+	motA-2	DVU2229	0.78	-0.3
2,322,059	-	motA-2	DVU2229	0.79	+0.2
2,322,061	+	motA-2	DVU2229	0.79	+0.1
2,322,082	+	motA-2	DVU2229	0.82	-0.3
2,322,301	+				-0.8
2,322,306	+				-0.7
2,322,387	-				+0.6
2,322,432	+	deoD	DVU2230	0.12	-0.1
2,322,432	+	deoD	DVU2230	0.12	+0.8
2,322,440	-	deoD	DVU2230	0.13	-0.3
2,322,441	+	deoD	DVU2230	0.13	-0.1
2,322,485	-	deoD	DVU2230	0.18	+0.1
2,322,620	+	deoD	DVU2230	0.34	-1.1
2,322,653	-	deoD	DVU2230	0.38	-0.4
2,322,722	+	deoD	DVU2230	0.47	-0.2
2,322,722	+	deoD	DVU2230	0.47	+1.0
2,322,759	+	deoD	DVU2230	0.51	+1.7
2,322,806	+	deoD	DVU2230	0.57	-1.2
2,322,816	+	deoD	DVU2230	0.58	-0.7
2,322,829	+	deoD	DVU2230	0.60	-0.4
2,322,837	-	deoD	DVU2230	0.61	-0.3
2,322,837	-	deoD	DVU2230	0.61	+0.3
2,322,886	+	deoD	DVU2230	0.67	-0.4
2,322,949	-	deoD	DVU2230	0.74	-0.1
2,323,012	+	deoD	DVU2230	0.82	+0.6
2,323,020	-	deoD	DVU2230	0.83	+0.0
2,323,071	-	deoD	DVU2230	0.89	+0.2
2,323,086	-				+1.0
2,323,096	-				-0.0
2,323,124	+				+1.6
2,323,209	+				-0.6