Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09875

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
2,097,053	+		ABZR87_RS09870	0.17	-0.4
2,097,086	+		ABZR87_RS09870	0.20	-0.1
2,097,126	-		ABZR87_RS09870	0.23	+0.3
2,097,137	+		ABZR87_RS09870	0.24	-0.4
2,097,138	-		ABZR87_RS09870	0.24	-0.3
2,097,227	+		ABZR87_RS09870	0.32	-0.3
2,097,227	+		ABZR87_RS09870	0.32	+0.2
2,097,227	+		ABZR87_RS09870	0.32	-1.0
2,097,227	+		ABZR87_RS09870	0.32	+0.4
2,097,227	+		ABZR87_RS09870	0.32	-0.6
2,097,228	-		ABZR87_RS09870	0.32	+0.3
2,097,230	+		ABZR87_RS09870	0.32	-0.5
2,097,230	+		ABZR87_RS09870	0.32	-0.1
2,097,233	+		ABZR87_RS09870	0.32	+0.8
2,097,234	-		ABZR87_RS09870	0.32	+2.2
2,097,512	+		ABZR87_RS09870	0.56	-1.3
2,097,512	+		ABZR87_RS09870	0.56	-0.0
2,097,513	-		ABZR87_RS09870	0.56	-0.4
2,097,522	-		ABZR87_RS09870	0.57	+0.1
2,097,600	-		ABZR87_RS09870	0.63	+0.7
2,097,837	-		ABZR87_RS09870	0.84	+0.2
2,097,908	+		ABZR87_RS09870	0.90	+0.1
2,097,908	+		ABZR87_RS09870	0.90	-0.1
2,097,909	-		ABZR87_RS09870	0.90	+0.4
2,097,909	-		ABZR87_RS09870	0.90	-0.8
2,097,968	+				-0.4
2,097,968	+				-0.5
2,098,071	+				+2.2
2,098,072	-				+0.7
2,098,072	-				-0.6
2,098,072	-				+0.1
2,098,338	+		ABZR87_RS09875	0.48	-0.8
2,098,531	-		ABZR87_RS09875	0.80	-0.7
2,098,531	-		ABZR87_RS09875	0.80	-0.8
2,098,531	-		ABZR87_RS09875	0.80	-0.4
2,098,813	+		ABZR87_RS09880	0.17	-0.4
2,098,813	+		ABZR87_RS09880	0.17	+0.1
2,098,813	+		ABZR87_RS09880	0.17	-0.0
2,098,813	+		ABZR87_RS09880	0.17	-1.2
2,098,813	+		ABZR87_RS09880	0.17	+0.3
2,098,814	-		ABZR87_RS09880	0.17	-0.2
2,098,982	+		ABZR87_RS09880	0.36	-0.2
2,098,983	-		ABZR87_RS09880	0.36	+0.3
2,098,983	-		ABZR87_RS09880	0.36	-0.7
2,099,090	+		ABZR87_RS09880	0.48	-0.5
2,099,096	+		ABZR87_RS09880	0.49	-0.9
2,099,096	+		ABZR87_RS09880	0.49	+0.8
2,099,096	+		ABZR87_RS09880	0.49	-0.8
2,099,096	+		ABZR87_RS09880	0.49	+0.6
2,099,097	-		ABZR87_RS09880	0.49	+0.6
2,099,097	-		ABZR87_RS09880	0.49	+1.8
2,099,097	-		ABZR87_RS09880	0.49	+0.3
2,099,097	-		ABZR87_RS09880	0.49	-0.7
2,099,097	-		ABZR87_RS09880	0.49	+0.8
2,099,228	+		ABZR87_RS09880	0.64	-0.3
2,099,228	+		ABZR87_RS09880	0.64	+1.7
2,099,228	+		ABZR87_RS09880	0.64	-0.9
2,099,228	+		ABZR87_RS09880	0.64	-0.3
2,099,228	+		ABZR87_RS09880	0.64	+0.3
2,099,228	+		ABZR87_RS09880	0.64	+0.1
2,099,228	+		ABZR87_RS09880	0.64	-0.9
2,099,228	+		ABZR87_RS09880	0.64	-0.0
2,099,228	+		ABZR87_RS09880	0.64	+0.9
2,099,229	-		ABZR87_RS09880	0.64	-0.2
2,099,229	-		ABZR87_RS09880	0.64	+0.0
2,099,229	-		ABZR87_RS09880	0.64	-0.5
2,099,229	-		ABZR87_RS09880	0.64	+0.6
2,099,294	+		ABZR87_RS09880	0.71	+0.3
2,099,294	+		ABZR87_RS09880	0.71	-0.3
2,099,294	+		ABZR87_RS09880	0.71	+0.4
2,099,294	+		ABZR87_RS09880	0.71	+0.9
2,099,295	-		ABZR87_RS09880	0.71	+0.6
2,099,295	-		ABZR87_RS09880	0.71	-0.3
2,099,300	+		ABZR87_RS09880	0.72	+0.0
2,099,300	+		ABZR87_RS09880	0.72	-0.0
2,099,301	-		ABZR87_RS09880	0.72	+0.1
2,099,483	+				-0.1
2,099,483	+				+1.1
2,099,483	+				-0.5
2,099,483	+				-0.6
2,099,484	-				-0.7
2,099,559	-				-0.1
2,099,590	+				+0.7
2,099,591	-				+1.0
2,099,591	-				-0.7
2,099,591	-				+0.6
2,099,591	-				+1.8
2,099,591	-				+0.7
2,099,591	-				+0.3
2,099,591	-				-0.2
2,099,591	-				-0.4
2,099,592	+				-0.2
2,099,592	+				+1.8
2,099,592	+				+0.8
2,099,592	+				+0.2
2,099,592	+				-0.2
2,099,592	+				-0.8
2,099,592	+				-0.3
2,099,592	+				+0.7
2,099,592	+				-1.0
2,099,593	-				-0.1
2,099,593	-				-0.2
2,099,593	-				+0.6
2,099,593	-				+3.2
2,099,593	-				+0.5
2,099,593	-				-0.6
2,099,593	-				-0.4
2,099,593	-				-0.4
2,099,593	-				-0.2
2,099,593	-				+0.1