Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11325

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
2,403,349	+				-0.2
2,403,349	+				-0.1
2,403,373	+				+0.3
2,403,373	+				+0.4
2,403,373	+				+0.1
2,403,374	-				+0.6
2,403,374	-				+0.2
2,403,402	+				-0.5
2,403,403	-				+0.1
2,403,547	+		ABZR87_RS11320	0.21	+0.3
2,403,547	+		ABZR87_RS11320	0.21	+0.0
2,403,603	+		ABZR87_RS11320	0.39	-0.1
2,403,603	+		ABZR87_RS11320	0.39	+0.0
2,403,791	+				+2.6
2,403,792	-				+0.2
2,403,881	+				+1.1
2,403,881	+				-0.2
2,403,881	+				+0.3
2,403,881	+				-0.6
2,403,881	+				+0.3
2,403,882	-				-0.5
2,403,884	+				-1.4
2,403,884	+				-0.6
2,403,884	+				+0.1
2,403,884	+				-0.3
2,403,885	-				+0.6
2,403,885	-				-0.2
2,403,885	-				-0.2
2,403,885	-				-0.2
2,403,885	-				+0.7
2,403,885	-				+0.5
2,403,885	-				-0.2
2,403,895	-				-0.3
2,403,895	-				+0.3
2,403,914	+				-0.5
2,404,048	-				+0.6
2,404,222	-		ABZR87_RS11325	0.47	-0.2
2,404,241	+		ABZR87_RS11325	0.57	-0.7
2,404,241	+		ABZR87_RS11325	0.57	-1.1
2,404,241	+		ABZR87_RS11325	0.57	-0.7
2,404,242	-		ABZR87_RS11325	0.58	-0.3
2,404,242	-		ABZR87_RS11325	0.58	-0.4
2,404,442	+				+1.0
2,404,442	+				-0.9
2,404,443	-				-0.9
2,404,754	+		ABZR87_RS11330	0.48	+1.8
2,404,755	-		ABZR87_RS11330	0.48	-0.2
2,404,755	-		ABZR87_RS11330	0.48	-0.3
2,404,755	-		ABZR87_RS11330	0.48	+0.5
2,405,057	+				-0.8
2,405,057	+				-0.9
2,405,102	+				+0.2
2,405,103	-				-1.0
2,405,103	-				+0.1
2,405,103	-				-0.2
2,405,105	-				-2.7
2,405,127	+				-1.1
2,405,129	+				+1.6
2,405,210	-				-0.1
2,405,210	-				-0.7
2,405,229	+				+0.1
2,405,229	+				-0.3
2,405,229	+				+0.9
2,405,230	-				-3.0
2,405,269	-				+0.6