Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2779 and DVU2780 are separated by 141 nucleotides DVU2780 and DVU2781 are separated by 393 nucleotides
DVU2779: DVU2779 - extracellular solute-binding protein, putative (TIGR), at 2,884,963 to 2,886,348
DVU2779
DVU2780: DVU2780 - membrane protein, putative (TIGR), at 2,886,490 to 2,887,365
DVU2780
DVU2781: DVU2781 - hypothetical protein (TIGR), at 2,887,759 to 2,888,325
DVU2781
Position (kb)
2886
2887
2888 Strain fitness (log2 ratio)
-1
0
1
2 at 2885.524 kb on - strand, within DVU2779 at 2885.549 kb on - strand, within DVU2779 at 2885.600 kb on - strand, within DVU2779 at 2885.600 kb on - strand, within DVU2779 at 2885.600 kb on - strand, within DVU2779 at 2885.649 kb on - strand, within DVU2779 at 2885.768 kb on - strand, within DVU2779 at 2885.970 kb on + strand, within DVU2779 at 2886.079 kb on - strand, within DVU2779 at 2886.108 kb on + strand, within DVU2779 at 2886.115 kb on + strand, within DVU2779 at 2886.123 kb on - strand, within DVU2779 at 2886.123 kb on - strand, within DVU2779 at 2886.256 kb on - strand at 2886.344 kb on + strand at 2886.344 kb on + strand at 2886.386 kb on - strand at 2886.431 kb on - strand at 2886.454 kb on + strand at 2886.490 kb on + strand at 2886.536 kb on - strand at 2886.536 kb on - strand at 2886.600 kb on + strand, within DVU2780 at 2886.601 kb on - strand, within DVU2780 at 2886.607 kb on - strand, within DVU2780 at 2886.611 kb on - strand, within DVU2780 at 2886.682 kb on - strand, within DVU2780 at 2886.726 kb on + strand, within DVU2780 at 2886.746 kb on + strand, within DVU2780 at 2886.754 kb on - strand, within DVU2780 at 2886.794 kb on - strand, within DVU2780 at 2886.862 kb on - strand, within DVU2780 at 2886.871 kb on + strand, within DVU2780 at 2886.914 kb on + strand, within DVU2780 at 2887.024 kb on - strand, within DVU2780 at 2887.024 kb on - strand, within DVU2780 at 2887.024 kb on - strand, within DVU2780 at 2887.024 kb on - strand, within DVU2780 at 2887.048 kb on + strand, within DVU2780 at 2887.261 kb on - strand, within DVU2780 at 2887.261 kb on - strand, within DVU2780 at 2887.287 kb on + strand at 2887.371 kb on - strand at 2887.430 kb on + strand at 2887.558 kb on - strand at 2887.757 kb on + strand at 2887.765 kb on - strand at 2887.787 kb on + strand at 2887.811 kb on + strand at 2887.863 kb on - strand, within DVU2781 at 2887.883 kb on + strand, within DVU2781 at 2887.894 kb on + strand, within DVU2781 at 2887.965 kb on - strand, within DVU2781 at 2887.970 kb on - strand, within DVU2781 at 2887.993 kb on + strand, within DVU2781 at 2887.998 kb on - strand, within DVU2781 at 2887.998 kb on - strand, within DVU2781 at 2888.086 kb on - strand, within DVU2781 at 2888.092 kb on + strand, within DVU2781 at 2888.167 kb on + strand, within DVU2781 at 2888.203 kb on + strand, within DVU2781 at 2888.362 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 2,885,524 - DVU2779 0.40 -0.1 2,885,549 - DVU2779 0.42 -0.7 2,885,600 - DVU2779 0.46 -1.0 2,885,600 - DVU2779 0.46 +0.7 2,885,600 - DVU2779 0.46 -1.2 2,885,649 - DVU2779 0.49 -0.2 2,885,768 - DVU2779 0.58 -0.5 2,885,970 + DVU2779 0.73 -0.5 2,886,079 - DVU2779 0.81 +0.2 2,886,108 + DVU2779 0.83 -1.0 2,886,115 + DVU2779 0.83 +0.4 2,886,123 - DVU2779 0.84 -0.3 2,886,123 - DVU2779 0.84 +0.5 2,886,256 - -0.1 2,886,344 + +0.4 2,886,344 + +0.7 2,886,386 - -0.2 2,886,431 - -1.0 2,886,454 + -0.9 2,886,490 + -0.4 2,886,536 - +0.6 2,886,536 - -0.1 2,886,600 + DVU2780 0.13 +1.8 2,886,601 - DVU2780 0.13 +0.8 2,886,607 - DVU2780 0.13 +0.1 2,886,611 - DVU2780 0.14 -0.0 2,886,682 - DVU2780 0.22 -1.2 2,886,726 + DVU2780 0.27 +0.0 2,886,746 + DVU2780 0.29 +0.3 2,886,754 - DVU2780 0.30 +0.0 2,886,794 - DVU2780 0.35 +0.7 2,886,862 - DVU2780 0.42 -0.4 2,886,871 + DVU2780 0.43 +0.9 2,886,914 + DVU2780 0.48 +0.8 2,887,024 - DVU2780 0.61 -0.4 2,887,024 - DVU2780 0.61 -0.9 2,887,024 - DVU2780 0.61 +0.1 2,887,024 - DVU2780 0.61 +1.0 2,887,048 + DVU2780 0.64 -0.7 2,887,261 - DVU2780 0.88 -0.1 2,887,261 - DVU2780 0.88 +0.3 2,887,287 + -0.4 2,887,371 - -0.5 2,887,430 + +2.3 2,887,558 - -1.6 2,887,757 + +1.3 2,887,765 - -1.0 2,887,787 + +1.7 2,887,811 + +1.0 2,887,863 - DVU2781 0.18 -0.0 2,887,883 + DVU2781 0.22 +0.5 2,887,894 + DVU2781 0.24 -0.1 2,887,965 - DVU2781 0.36 -0.0 2,887,970 - DVU2781 0.37 -0.4 2,887,993 + DVU2781 0.41 +0.0 2,887,998 - DVU2781 0.42 -0.0 2,887,998 - DVU2781 0.42 -0.5 2,888,086 - DVU2781 0.58 -0.2 2,888,092 + DVU2781 0.59 -0.5 2,888,167 + DVU2781 0.72 +0.6 2,888,203 + DVU2781 0.78 -1.7 2,888,362 + -0.5
Or see this region's nucleotide sequence