Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2331
Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polyethylene glycol 5% |
|---|---|---|---|---|---|
| remove | |||||
| 2,426,050 | - | E.coliMinDlike) | DVU2330 | 0.23 | -0.5 |
| 2,426,110 | - | E.coliMinDlike) | DVU2330 | 0.30 | -0.3 |
| 2,426,362 | - | E.coliMinDlike) | DVU2330 | 0.58 | -1.8 |
| 2,426,377 | + | E.coliMinDlike) | DVU2330 | 0.60 | -1.4 |
| 2,426,392 | - | E.coliMinDlike) | DVU2330 | 0.62 | -0.2 |
| 2,426,598 | - | E.coliMinDlike) | DVU2330 | 0.85 | +0.1 |
| 2,426,724 | + | -1.3 | |||
| 2,426,732 | - | +0.2 | |||
| 2,426,846 | + | -0.1 | |||
| 2,426,861 | - | +0.7 | |||
| 2,426,910 | - | -0.2 | |||
| 2,426,986 | - | -0.1 | |||
| 2,426,986 | - | +0.8 | |||
| 2,427,318 | + | DVU2331 | 0.23 | -1.6 | |
| 2,427,366 | + | DVU2331 | 0.27 | -0.0 | |
| 2,427,396 | - | DVU2331 | 0.30 | -0.2 | |
| 2,427,592 | - | DVU2331 | 0.45 | -0.3 | |
| 2,427,592 | - | DVU2331 | 0.45 | +0.7 | |
| 2,427,703 | - | DVU2331 | 0.54 | -0.4 | |
| 2,427,799 | + | DVU2331 | 0.62 | -0.6 | |
| 2,427,804 | + | DVU2331 | 0.63 | +0.2 | |
| 2,427,812 | - | DVU2331 | 0.63 | +0.0 | |
| 2,427,814 | + | DVU2331 | 0.63 | +1.4 | |
| 2,427,915 | + | DVU2331 | 0.72 | +2.4 | |
| 2,427,915 | + | DVU2331 | 0.72 | +0.5 | |
| 2,427,950 | - | DVU2331 | 0.75 | +0.0 | |
| 2,428,366 | - | +0.2 | |||
| 2,428,467 | + | -0.6 | |||
| 2,428,826 | - | proC | DVU2332 | 0.29 | -1.1 |
| 2,428,842 | - | proC | DVU2332 | 0.31 | -0.7 |
| 2,428,933 | + | proC | DVU2332 | 0.43 | -1.5 |
| 2,429,115 | + | proC | DVU2332 | 0.65 | -0.8 |
Or see this region's nucleotide sequence