Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11990

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,544,092	+				+0.4
2,544,092	+				+0.7
2,544,093	-				-0.8
2,544,093	-				-1.8
2,544,093	-				+0.3
2,544,223	+		ABZR87_RS11980	0.72	+0.8
2,544,358	-				-1.1
2,544,358	-				+0.7
2,544,460	+		ABZR87_RS11985	0.16	+0.8
2,544,461	-		ABZR87_RS11985	0.16	-0.0
2,544,476	-		ABZR87_RS11985	0.19	+0.1
2,544,476	-		ABZR87_RS11985	0.19	+1.1
2,544,532	+		ABZR87_RS11985	0.27	+0.9
2,544,533	-		ABZR87_RS11985	0.27	-0.2
2,544,614	+		ABZR87_RS11985	0.40	-0.0
2,544,614	+		ABZR87_RS11985	0.40	+0.3
2,544,615	-		ABZR87_RS11985	0.40	-1.4
2,544,663	+		ABZR87_RS11985	0.48	+0.1
2,544,924	+		ABZR87_RS11985	0.88	+0.8
2,544,924	+		ABZR87_RS11985	0.88	-1.8
2,544,924	+		ABZR87_RS11985	0.88	+1.0
2,544,924	+		ABZR87_RS11985	0.88	+0.1
2,544,924	+		ABZR87_RS11985	0.88	+1.1
2,544,925	-		ABZR87_RS11985	0.88	+1.0
2,544,966	+				+0.6
2,544,967	-				-1.3
2,545,038	+				+0.9
2,545,064	+				+0.8
2,545,065	-				+1.6
2,545,065	-				-0.3
2,545,175	+		ABZR87_RS11990	0.11	-0.5
2,545,263	+		ABZR87_RS11990	0.19	-1.5
2,545,264	-		ABZR87_RS11990	0.19	-1.8
2,545,264	-		ABZR87_RS11990	0.19	+0.2
2,545,854	-		ABZR87_RS11990	0.67	+0.1
2,546,309	+				-0.9
2,546,310	-				+1.6
2,546,310	-				+1.0
2,546,492	+		ABZR87_RS11995	0.19	-0.5
2,546,493	-		ABZR87_RS11995	0.19	+0.3
2,546,564	+		ABZR87_RS11995	0.28	+0.9
2,546,565	-		ABZR87_RS11995	0.29	-0.5
2,546,588	+		ABZR87_RS11995	0.32	-1.6
2,546,588	+		ABZR87_RS11995	0.32	-1.2
2,546,774	+		ABZR87_RS11995	0.56	-0.6
2,546,775	-		ABZR87_RS11995	0.56	+0.7
2,546,834	+		ABZR87_RS11995	0.63	+0.9
2,546,834	+		ABZR87_RS11995	0.63	+0.8
2,546,835	-		ABZR87_RS11995	0.64	-0.9
2,546,835	-		ABZR87_RS11995	0.64	-1.3
2,546,835	-		ABZR87_RS11995	0.64	+0.0
2,546,924	+		ABZR87_RS11995	0.75	-3.2
2,546,925	-		ABZR87_RS11995	0.75	+0.1
2,546,925	-		ABZR87_RS11995	0.75	-0.4
2,546,925	-		ABZR87_RS11995	0.75	-0.6
2,546,978	+		ABZR87_RS11995	0.82	-0.5
2,546,978	+		ABZR87_RS11995	0.82	-1.0
2,546,987	+		ABZR87_RS11995	0.83	+0.7
2,546,988	-		ABZR87_RS11995	0.83	+0.4
2,546,988	-		ABZR87_RS11995	0.83	+1.3
2,546,988	-		ABZR87_RS11995	0.83	+1.7
2,546,988	-		ABZR87_RS11995	0.83	+0.1
2,546,988	-		ABZR87_RS11995	0.83	-0.2
2,546,988	-		ABZR87_RS11995	0.83	+1.7
2,547,029	+		ABZR87_RS11995	0.89	+0.0
2,547,030	-		ABZR87_RS11995	0.89	+1.7