Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11470

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,429,887	+		ABZR87_RS11460	0.50	+0.6
2,429,887	+		ABZR87_RS11460	0.50	-0.1
2,429,887	+		ABZR87_RS11460	0.50	-0.1
2,429,887	+		ABZR87_RS11460	0.50	-0.4
2,429,887	+		ABZR87_RS11460	0.50	-0.1
2,429,887	+		ABZR87_RS11460	0.50	+1.1
2,429,888	-		ABZR87_RS11460	0.50	+0.7
2,430,517	+				-0.2
2,430,517	+				-0.8
2,430,517	+				-0.3
2,430,517	+				+0.3
2,430,517	+				-0.4
2,430,518	-				-0.8
2,430,518	-				-1.2
2,430,518	-				-1.0
2,430,963	-		ABZR87_RS11470	0.30	+0.6
2,431,148	+		ABZR87_RS11470	0.66	+0.5
2,431,148	+		ABZR87_RS11470	0.66	-1.0
2,431,148	+		ABZR87_RS11470	0.66	-0.8
2,431,148	+		ABZR87_RS11470	0.66	-2.4
2,431,149	-		ABZR87_RS11470	0.66	-2.1
2,431,149	-		ABZR87_RS11470	0.66	-1.6
2,431,149	-		ABZR87_RS11470	0.66	-1.2
2,431,149	-		ABZR87_RS11470	0.66	-1.2
2,431,319	+				+0.1
2,431,319	+				+0.1
2,431,320	-				-1.2
2,431,320	-				+2.0
2,431,326	-				-1.3
2,431,481	+		ABZR87_RS11475	0.36	+0.4
2,431,755	-				-0.7
2,431,774	+				+0.9
2,431,774	+				+1.1
2,431,775	-				-1.5
2,431,780	+				+1.9
2,431,797	+				+0.5
2,431,797	+				-1.2
2,431,797	+				+1.1
2,431,797	+				+0.4
2,431,798	-				-0.2
2,431,798	-				+0.4
2,431,798	-				-0.4
2,431,810	+				+1.3
2,431,810	+				+0.5
2,431,811	-				+0.1
2,431,811	-				-0.3
2,431,811	-				-0.5
2,431,824	-				-1.4
2,431,865	+				+0.7
2,432,199	-		ABZR87_RS11480	0.15	+0.1
2,432,199	-		ABZR87_RS11480	0.15	-0.5
2,432,246	+		ABZR87_RS11480	0.17	+0.6
2,432,246	+		ABZR87_RS11480	0.17	-0.3
2,432,246	+		ABZR87_RS11480	0.17	-0.9
2,432,247	-		ABZR87_RS11480	0.17	+1.1
2,432,247	-		ABZR87_RS11480	0.17	-0.3
2,432,247	-		ABZR87_RS11480	0.17	-1.0
2,432,312	+		ABZR87_RS11480	0.20	-0.3
2,432,312	+		ABZR87_RS11480	0.20	+1.7
2,432,312	+		ABZR87_RS11480	0.20	+0.5
2,432,313	-		ABZR87_RS11480	0.20	+0.3
2,432,313	-		ABZR87_RS11480	0.20	+0.4
2,432,321	+		ABZR87_RS11480	0.20	+0.0
2,432,321	+		ABZR87_RS11480	0.20	-2.6