Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2378

Experiment: KB with Naringin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Naringin 250 ug/ml
2,756,684	+		Psyr_2377	0.52	-1.5
2,756,802	+		Psyr_2377	0.59	+0.6
2,756,802	+		Psyr_2377	0.59	-1.9
2,756,802	+		Psyr_2377	0.59	+0.1
2,756,803	-		Psyr_2377	0.59	+0.4
2,756,803	-		Psyr_2377	0.59	+0.1
2,756,803	-		Psyr_2377	0.59	-0.7
2,756,803	-		Psyr_2377	0.59	-0.3
2,757,273	+		Psyr_2377	0.88	-0.4
2,757,273	+		Psyr_2377	0.88	+1.2
2,757,274	-		Psyr_2377	0.88	-1.5
2,757,274	-		Psyr_2377	0.88	-0.3
2,757,431	+				+0.2
2,757,432	-				-0.6
2,757,432	-				-0.1
2,757,479	+				-0.1
2,757,480	-				+0.3
2,757,480	-				-0.8
2,757,480	-				+0.1
2,757,664	+				-1.5
2,757,665	-				-0.5
2,757,665	-				+0.8
2,757,665	-				+0.6
2,757,666	+				+0.3
2,757,666	+				-1.5
2,757,737	+				+0.7
2,757,928	+		Psyr_2378	0.32	-0.3
2,758,219	+		Psyr_2378	0.69	+0.1
2,758,219	+		Psyr_2378	0.69	-0.2
2,758,220	-		Psyr_2378	0.69	-0.5
2,758,220	-		Psyr_2378	0.69	+0.4
2,758,220	-		Psyr_2378	0.69	-1.5
2,758,220	-		Psyr_2378	0.69	-1.4
2,758,220	-		Psyr_2378	0.69	-1.5
2,758,238	+		Psyr_2378	0.72	-1.6
2,758,239	-		Psyr_2378	0.72	-1.4
2,758,239	-		Psyr_2378	0.72	-0.6
2,758,352	+		Psyr_2378	0.86	-1.6
2,758,353	-		Psyr_2378	0.86	-1.0
2,758,470	+				+0.6
2,758,471	-				-1.7
2,758,852	-		Psyr_2379	0.29	+0.4
2,759,061	+		Psyr_2379	0.45	-1.6
2,759,061	+		Psyr_2379	0.45	-0.0
2,759,061	+		Psyr_2379	0.45	-1.2
2,759,061	+		Psyr_2379	0.45	-0.0
2,759,061	+		Psyr_2379	0.45	-0.1
2,759,062	-		Psyr_2379	0.45	-1.3
2,759,062	-		Psyr_2379	0.45	-0.4
2,759,062	-		Psyr_2379	0.45	+0.5
2,759,062	-		Psyr_2379	0.45	+4.0
2,759,065	+		Psyr_2379	0.45	+1.7
2,759,065	+		Psyr_2379	0.45	-0.7
2,759,065	+		Psyr_2379	0.45	-0.0
2,759,065	+		Psyr_2379	0.45	+0.4
2,759,065	+		Psyr_2379	0.45	-2.2
2,759,066	-		Psyr_2379	0.45	-0.6
2,759,066	-		Psyr_2379	0.45	+0.4
2,759,066	-		Psyr_2379	0.45	+0.1
2,759,066	-		Psyr_2379	0.45	+1.2
2,759,066	-		Psyr_2379	0.45	+0.7
2,759,066	-		Psyr_2379	0.45	-0.0
2,759,066	-		Psyr_2379	0.45	-0.1
2,759,066	-		Psyr_2379	0.45	+1.0
2,759,066	-		Psyr_2379	0.45	+1.0
2,759,111	-		Psyr_2379	0.48	+0.0
2,759,176	+		Psyr_2379	0.53	+1.2
2,759,176	+		Psyr_2379	0.53	+1.4
2,759,177	-		Psyr_2379	0.53	+0.3
2,759,440	+		Psyr_2379	0.73	-0.3
2,759,440	+		Psyr_2379	0.73	-1.2