Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4337 and Psyr_4338 are separated by 52 nucleotides Psyr_4338 and Psyr_4339 are separated by 122 nucleotides
Psyr_4337: Psyr_4337 - AMP nucleosidase, at 5,188,303 to 5,189,766
_4337
Psyr_4338: Psyr_4338 - Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region, at 5,189,819 to 5,191,468
_4338
Psyr_4339: Psyr_4339 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase, at 5,191,591 to 5,193,624
_4339
Position (kb) 5189
5190
5191
5192 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5188.876 kb on + strand, within Psyr_4337 at 5188.876 kb on + strand, within Psyr_4337 at 5189.051 kb on - strand, within Psyr_4337 at 5189.135 kb on + strand, within Psyr_4337 at 5189.136 kb on - strand, within Psyr_4337 at 5189.136 kb on - strand, within Psyr_4337 at 5189.136 kb on - strand, within Psyr_4337 at 5189.144 kb on + strand, within Psyr_4337 at 5189.144 kb on + strand, within Psyr_4337 at 5189.144 kb on + strand, within Psyr_4337 at 5189.145 kb on - strand, within Psyr_4337 at 5189.145 kb on - strand, within Psyr_4337 at 5189.145 kb on - strand, within Psyr_4337 at 5189.145 kb on - strand, within Psyr_4337 at 5189.145 kb on - strand, within Psyr_4337 at 5189.170 kb on + strand, within Psyr_4337 at 5189.170 kb on + strand, within Psyr_4337 at 5189.170 kb on + strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.171 kb on - strand, within Psyr_4337 at 5189.195 kb on + strand, within Psyr_4337 at 5189.195 kb on + strand, within Psyr_4337 at 5189.195 kb on + strand, within Psyr_4337 at 5189.195 kb on + strand, within Psyr_4337 at 5189.195 kb on + strand, within Psyr_4337 at 5189.196 kb on - strand, within Psyr_4337 at 5189.196 kb on - strand, within Psyr_4337 at 5189.196 kb on - strand, within Psyr_4337 at 5189.196 kb on - strand, within Psyr_4337 at 5189.196 kb on - strand, within Psyr_4337 at 5189.279 kb on + strand, within Psyr_4337 at 5189.279 kb on + strand, within Psyr_4337 at 5189.279 kb on + strand, within Psyr_4337 at 5189.279 kb on + strand, within Psyr_4337 at 5189.279 kb on + strand, within Psyr_4337 at 5189.280 kb on - strand, within Psyr_4337 at 5189.396 kb on + strand, within Psyr_4337 at 5189.396 kb on + strand, within Psyr_4337 at 5189.396 kb on + strand, within Psyr_4337 at 5189.397 kb on - strand, within Psyr_4337 at 5189.397 kb on - strand, within Psyr_4337 at 5189.397 kb on - strand, within Psyr_4337 at 5189.484 kb on - strand, within Psyr_4337 at 5189.484 kb on - strand, within Psyr_4337 at 5189.522 kb on + strand, within Psyr_4337 at 5189.523 kb on - strand, within Psyr_4337 at 5189.523 kb on - strand, within Psyr_4337 at 5189.523 kb on - strand, within Psyr_4337 at 5189.523 kb on - strand, within Psyr_4337 at 5189.523 kb on - strand, within Psyr_4337 at 5189.588 kb on + strand, within Psyr_4337 at 5189.588 kb on + strand, within Psyr_4337 at 5189.588 kb on + strand, within Psyr_4337 at 5189.589 kb on - strand, within Psyr_4337 at 5189.589 kb on - strand, within Psyr_4337 at 5189.589 kb on - strand, within Psyr_4337 at 5189.589 kb on - strand, within Psyr_4337 at 5189.660 kb on + strand at 5189.661 kb on - strand at 5189.722 kb on + strand at 5189.722 kb on + strand at 5189.859 kb on - strand at 5190.241 kb on - strand, within Psyr_4338 at 5190.241 kb on - strand, within Psyr_4338 at 5190.306 kb on + strand, within Psyr_4338 at 5190.306 kb on + strand, within Psyr_4338 at 5190.307 kb on - strand, within Psyr_4338 at 5190.307 kb on - strand, within Psyr_4338 at 5190.307 kb on - strand, within Psyr_4338 at 5190.307 kb on - strand, within Psyr_4338 at 5190.696 kb on + strand, within Psyr_4338 at 5190.696 kb on + strand, within Psyr_4338 at 5190.696 kb on + strand, within Psyr_4338 at 5190.697 kb on - strand, within Psyr_4338 at 5190.814 kb on + strand, within Psyr_4338 at 5190.814 kb on + strand, within Psyr_4338 at 5190.814 kb on + strand, within Psyr_4338 at 5190.814 kb on + strand, within Psyr_4338 at 5190.814 kb on + strand, within Psyr_4338 at 5190.815 kb on - strand, within Psyr_4338 at 5190.831 kb on + strand, within Psyr_4338 at 5190.832 kb on - strand, within Psyr_4338 at 5190.972 kb on + strand, within Psyr_4338 at 5190.973 kb on - strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.098 kb on + strand, within Psyr_4338 at 5191.099 kb on - strand, within Psyr_4338 at 5191.099 kb on - strand, within Psyr_4338 at 5191.099 kb on - strand, within Psyr_4338 at 5191.197 kb on + strand, within Psyr_4338 at 5191.198 kb on - strand, within Psyr_4338 at 5191.321 kb on - strand at 5191.488 kb on + strand at 5191.488 kb on + strand at 5191.488 kb on + strand at 5191.488 kb on + strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.489 kb on - strand at 5191.499 kb on + strand at 5191.499 kb on + strand at 5191.500 kb on - strand at 5191.566 kb on + strand at 5191.567 kb on - strand at 5191.580 kb on + strand at 5191.581 kb on - strand at 5191.581 kb on - strand at 5191.592 kb on + strand at 5191.592 kb on + strand at 5191.593 kb on - strand at 5191.593 kb on - strand at 5191.593 kb on - strand at 5191.594 kb on + strand at 5191.594 kb on + strand at 5191.594 kb on + strand at 5191.595 kb on - strand at 5191.595 kb on - strand at 5191.595 kb on - strand at 5191.595 kb on - strand at 5191.671 kb on + strand at 5191.815 kb on - strand, within Psyr_4339 at 5191.877 kb on + strand, within Psyr_4339 at 5191.877 kb on + strand, within Psyr_4339 at 5191.878 kb on - strand, within Psyr_4339 at 5191.878 kb on - strand, within Psyr_4339 at 5192.020 kb on - strand, within Psyr_4339 at 5192.129 kb on + strand, within Psyr_4339 at 5192.129 kb on + strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.130 kb on - strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.219 kb on + strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.220 kb on - strand, within Psyr_4339 at 5192.331 kb on + strand, within Psyr_4339 at 5192.331 kb on + strand, within Psyr_4339 at 5192.331 kb on + strand, within Psyr_4339 at 5192.332 kb on - strand, within Psyr_4339 at 5192.332 kb on - strand, within Psyr_4339 at 5192.332 kb on - strand, within Psyr_4339 at 5192.332 kb on - strand, within Psyr_4339 at 5192.332 kb on - strand, within Psyr_4339
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,188,876 + Psyr_4337 0.39 -0.1 5,188,876 + Psyr_4337 0.39 -0.6 5,189,051 - Psyr_4337 0.51 -0.6 5,189,135 + Psyr_4337 0.57 -0.1 5,189,136 - Psyr_4337 0.57 -0.1 5,189,136 - Psyr_4337 0.57 -0.4 5,189,136 - Psyr_4337 0.57 -0.4 5,189,144 + Psyr_4337 0.57 -0.9 5,189,144 + Psyr_4337 0.57 +0.1 5,189,144 + Psyr_4337 0.57 -0.4 5,189,145 - Psyr_4337 0.58 -0.9 5,189,145 - Psyr_4337 0.58 -2.4 5,189,145 - Psyr_4337 0.58 -0.3 5,189,145 - Psyr_4337 0.58 -0.6 5,189,145 - Psyr_4337 0.58 -0.5 5,189,170 + Psyr_4337 0.59 +0.8 5,189,170 + Psyr_4337 0.59 -0.2 5,189,170 + Psyr_4337 0.59 -0.1 5,189,171 - Psyr_4337 0.59 -0.5 5,189,171 - Psyr_4337 0.59 -1.6 5,189,171 - Psyr_4337 0.59 +0.9 5,189,171 - Psyr_4337 0.59 +1.1 5,189,171 - Psyr_4337 0.59 -0.2 5,189,171 - Psyr_4337 0.59 -0.8 5,189,195 + Psyr_4337 0.61 +4.1 5,189,195 + Psyr_4337 0.61 +2.7 5,189,195 + Psyr_4337 0.61 -1.4 5,189,195 + Psyr_4337 0.61 -0.7 5,189,195 + Psyr_4337 0.61 -0.7 5,189,196 - Psyr_4337 0.61 -1.8 5,189,196 - Psyr_4337 0.61 -0.9 5,189,196 - Psyr_4337 0.61 -0.3 5,189,196 - Psyr_4337 0.61 +0.5 5,189,196 - Psyr_4337 0.61 +0.5 5,189,279 + Psyr_4337 0.67 -1.3 5,189,279 + Psyr_4337 0.67 +0.1 5,189,279 + Psyr_4337 0.67 -0.6 5,189,279 + Psyr_4337 0.67 +0.1 5,189,279 + Psyr_4337 0.67 -0.3 5,189,280 - Psyr_4337 0.67 -2.3 5,189,396 + Psyr_4337 0.75 -0.6 5,189,396 + Psyr_4337 0.75 -0.6 5,189,396 + Psyr_4337 0.75 -0.9 5,189,397 - Psyr_4337 0.75 -0.4 5,189,397 - Psyr_4337 0.75 -1.7 5,189,397 - Psyr_4337 0.75 -2.0 5,189,484 - Psyr_4337 0.81 -0.2 5,189,484 - Psyr_4337 0.81 -0.1 5,189,522 + Psyr_4337 0.83 -0.6 5,189,523 - Psyr_4337 0.83 +0.4 5,189,523 - Psyr_4337 0.83 -0.0 5,189,523 - Psyr_4337 0.83 -0.6 5,189,523 - Psyr_4337 0.83 +0.6 5,189,523 - Psyr_4337 0.83 -1.2 5,189,588 + Psyr_4337 0.88 -0.6 5,189,588 + Psyr_4337 0.88 -1.6 5,189,588 + Psyr_4337 0.88 +0.4 5,189,589 - Psyr_4337 0.88 -0.9 5,189,589 - Psyr_4337 0.88 +0.8 5,189,589 - Psyr_4337 0.88 -0.3 5,189,589 - Psyr_4337 0.88 -2.5 5,189,660 + -0.8 5,189,661 - -0.3 5,189,722 + -1.9 5,189,722 + -1.5 5,189,859 - +0.5 5,190,241 - Psyr_4338 0.26 +0.9 5,190,241 - Psyr_4338 0.26 -0.4 5,190,306 + Psyr_4338 0.30 -1.9 5,190,306 + Psyr_4338 0.30 +3.7 5,190,307 - Psyr_4338 0.30 +0.5 5,190,307 - Psyr_4338 0.30 +0.3 5,190,307 - Psyr_4338 0.30 -0.6 5,190,307 - Psyr_4338 0.30 -1.7 5,190,696 + Psyr_4338 0.53 +1.4 5,190,696 + Psyr_4338 0.53 -0.1 5,190,696 + Psyr_4338 0.53 +0.3 5,190,697 - Psyr_4338 0.53 +0.2 5,190,814 + Psyr_4338 0.60 -2.1 5,190,814 + Psyr_4338 0.60 +1.2 5,190,814 + Psyr_4338 0.60 -2.5 5,190,814 + Psyr_4338 0.60 -0.9 5,190,814 + Psyr_4338 0.60 -0.2 5,190,815 - Psyr_4338 0.60 -0.3 5,190,831 + Psyr_4338 0.61 +0.3 5,190,832 - Psyr_4338 0.61 -2.4 5,190,972 + Psyr_4338 0.70 -0.5 5,190,973 - Psyr_4338 0.70 -0.3 5,191,098 + Psyr_4338 0.78 +0.9 5,191,098 + Psyr_4338 0.78 -0.9 5,191,098 + Psyr_4338 0.78 +0.6 5,191,098 + Psyr_4338 0.78 -1.5 5,191,098 + Psyr_4338 0.78 -0.3 5,191,098 + Psyr_4338 0.78 -0.7 5,191,098 + Psyr_4338 0.78 -0.3 5,191,098 + Psyr_4338 0.78 -1.9 5,191,099 - Psyr_4338 0.78 +0.5 5,191,099 - Psyr_4338 0.78 -0.3 5,191,099 - Psyr_4338 0.78 -0.5 5,191,197 + Psyr_4338 0.84 +0.5 5,191,198 - Psyr_4338 0.84 -0.6 5,191,321 - +1.3 5,191,488 + -0.5 5,191,488 + +0.4 5,191,488 + -0.3 5,191,488 + -0.3 5,191,489 - +0.4 5,191,489 - +0.1 5,191,489 - +0.7 5,191,489 - -0.3 5,191,489 - -0.3 5,191,489 - +0.8 5,191,489 - +0.2 5,191,499 + +3.1 5,191,499 + +0.5 5,191,500 - +0.4 5,191,566 + +1.0 5,191,567 - -0.7 5,191,580 + +0.4 5,191,581 - +0.2 5,191,581 - -0.8 5,191,592 + +1.3 5,191,592 + -1.0 5,191,593 - -0.4 5,191,593 - +1.2 5,191,593 - +0.5 5,191,594 + -1.3 5,191,594 + +1.1 5,191,594 + +1.5 5,191,595 - +0.8 5,191,595 - -1.3 5,191,595 - -2.8 5,191,595 - -0.9 5,191,671 + -0.6 5,191,815 - Psyr_4339 0.11 +0.1 5,191,877 + Psyr_4339 0.14 -0.4 5,191,877 + Psyr_4339 0.14 -1.0 5,191,878 - Psyr_4339 0.14 +0.2 5,191,878 - Psyr_4339 0.14 -0.2 5,192,020 - Psyr_4339 0.21 +0.5 5,192,129 + Psyr_4339 0.26 +0.2 5,192,129 + Psyr_4339 0.26 +0.2 5,192,130 - Psyr_4339 0.26 +0.9 5,192,130 - Psyr_4339 0.26 +1.0 5,192,130 - Psyr_4339 0.26 +1.4 5,192,130 - Psyr_4339 0.26 +0.1 5,192,130 - Psyr_4339 0.26 -0.1 5,192,130 - Psyr_4339 0.26 +0.1 5,192,219 + Psyr_4339 0.31 +0.4 5,192,219 + Psyr_4339 0.31 +0.2 5,192,219 + Psyr_4339 0.31 -0.8 5,192,219 + Psyr_4339 0.31 +0.4 5,192,219 + Psyr_4339 0.31 +0.3 5,192,219 + Psyr_4339 0.31 +1.2 5,192,219 + Psyr_4339 0.31 +1.0 5,192,219 + Psyr_4339 0.31 +0.2 5,192,220 - Psyr_4339 0.31 +1.5 5,192,220 - Psyr_4339 0.31 -0.1 5,192,220 - Psyr_4339 0.31 -1.1 5,192,220 - Psyr_4339 0.31 -0.9 5,192,220 - Psyr_4339 0.31 +0.7 5,192,220 - Psyr_4339 0.31 +0.6 5,192,220 - Psyr_4339 0.31 +0.3 5,192,220 - Psyr_4339 0.31 +0.7 5,192,220 - Psyr_4339 0.31 +0.7 5,192,220 - Psyr_4339 0.31 -0.4 5,192,331 + Psyr_4339 0.36 +0.5 5,192,331 + Psyr_4339 0.36 +0.2 5,192,331 + Psyr_4339 0.36 +1.1 5,192,332 - Psyr_4339 0.36 +1.4 5,192,332 - Psyr_4339 0.36 -0.2 5,192,332 - Psyr_4339 0.36 -0.6 5,192,332 - Psyr_4339 0.36 -0.1 5,192,332 - Psyr_4339 0.36 -1.0
Or see this region's nucleotide sequence