Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1993

Experiment: KB with Methanol 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Methanol 5 vol%
2,313,359	-		Psyr_1992	0.53	+0.9
2,313,506	-		Psyr_1992	0.67	-0.4
2,313,616	+		Psyr_1992	0.78	+0.7
2,313,847	+				+0.2
2,313,847	+				+0.6
2,313,847	+				+0.2
2,313,847	+				+0.2
2,313,847	+				-0.2
2,313,847	+				+0.6
2,313,847	+				-0.0
2,313,847	+				-1.3
2,313,847	+				-1.2
2,313,848	-				+0.4
2,313,848	-				-1.4
2,313,848	-				-0.1
2,313,848	-				-0.7
2,313,848	-				-2.3
2,313,945	-				-0.2
2,313,998	+				+1.3
2,314,038	+				+1.7
2,314,039	-				-0.8
2,314,155	-		Psyr_1993	0.14	-0.6
2,314,155	-		Psyr_1993	0.14	+2.1
2,314,178	+		Psyr_1993	0.16	-3.4
2,314,178	+		Psyr_1993	0.16	+0.7
2,314,179	-		Psyr_1993	0.17	+2.6
2,314,179	-		Psyr_1993	0.17	-1.0
2,314,237	+		Psyr_1993	0.23	+0.4
2,314,238	-		Psyr_1993	0.23	-1.2
2,314,262	+		Psyr_1993	0.26	+2.4
2,314,262	+		Psyr_1993	0.26	+0.6
2,314,548	-		Psyr_1993	0.58	-3.0
2,314,637	+		Psyr_1993	0.68	-2.4
2,314,637	+		Psyr_1993	0.68	+0.1
2,314,652	+		Psyr_1993	0.69	+2.1
2,314,652	+		Psyr_1993	0.69	+0.6
2,314,652	+		Psyr_1993	0.69	+0.9
2,314,653	-		Psyr_1993	0.70	+0.5
2,314,653	-		Psyr_1993	0.70	+1.3
2,314,653	-		Psyr_1993	0.70	+2.0
2,314,757	+		Psyr_1993	0.81	-0.2
2,314,757	+		Psyr_1993	0.81	+1.6
2,314,874	+				-0.4
2,314,875	-				-1.7
2,314,884	-				-1.8
2,314,915	+				+0.0
2,314,915	+				-0.5
2,314,916	-				-0.0
2,314,916	-				+1.7
2,314,965	-				+1.0
2,314,965	-				-1.2
2,314,965	-				-0.1
2,314,972	-				+1.3
2,314,972	-				-0.4
2,314,978	+				-1.0
2,314,979	-				-0.5
2,314,979	-				-0.3
2,314,986	-				+0.7
2,314,986	-				+2.9
2,314,992	+				-0.4
2,314,992	+				-1.6
2,314,993	-				+1.6
2,314,993	-				-2.0
2,314,999	+				-1.3
2,314,999	+				+1.6
2,314,999	+				+1.7
2,315,000	-				-1.0
2,315,000	-				+2.3
2,315,000	-				+0.9
2,315,000	-				+0.1
2,315,000	-				+0.2
2,315,000	-				+0.8
2,315,006	+				+0.7
2,315,006	+				-1.4
2,315,006	+				+3.6
2,315,006	+				-0.8
2,315,013	+				-0.2
2,315,013	+				+0.8
2,315,020	+				+0.1
2,315,025	+				+0.9