Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02815 and ECD_02816 are separated by 23 nucleotides ECD_02816 and ECD_02817 are separated by 9 nucleotides ECD_02817 and ECD_02818 overlap by 4 nucleotides
ECD_02815: ECD_02815 - Capsule polysaccharide export inner-membrane protein kpsE, at 2,946,767 to 2,947,903
_02815
ECD_02816: ECD_02816 - KpsD protein, at 2,947,927 to 2,949,603
_02816
ECD_02817: ECD_02817 - KpsU protein, at 2,949,613 to 2,950,353
_02817
ECD_02818: ECD_02818 - Capsule polysaccharide export protein KpsC, at 2,950,350 to 2,952,377
_02818
Position (kb)
2947
2948
2949
2950 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2947.034 kb on + strand, within ECD_02815 at 2947.121 kb on - strand, within ECD_02815 at 2947.166 kb on + strand, within ECD_02815 at 2947.178 kb on - strand, within ECD_02815 at 2947.199 kb on - strand, within ECD_02815 at 2947.258 kb on + strand, within ECD_02815 at 2947.466 kb on - strand, within ECD_02815 at 2947.520 kb on + strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.559 kb on - strand, within ECD_02815 at 2947.633 kb on - strand, within ECD_02815 at 2947.639 kb on + strand, within ECD_02815 at 2947.674 kb on + strand, within ECD_02815 at 2947.731 kb on + strand, within ECD_02815 at 2948.092 kb on - strand at 2948.198 kb on - strand, within ECD_02816 at 2948.198 kb on - strand, within ECD_02816 at 2948.199 kb on + strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.408 kb on + strand, within ECD_02816 at 2948.435 kb on - strand, within ECD_02816 at 2948.500 kb on + strand, within ECD_02816 at 2948.501 kb on - strand, within ECD_02816 at 2948.542 kb on + strand, within ECD_02816 at 2948.542 kb on + strand, within ECD_02816 at 2948.596 kb on + strand, within ECD_02816 at 2948.677 kb on - strand, within ECD_02816 at 2948.710 kb on + strand, within ECD_02816 at 2948.793 kb on + strand, within ECD_02816 at 2948.833 kb on + strand, within ECD_02816 at 2948.834 kb on - strand, within ECD_02816 at 2948.862 kb on + strand, within ECD_02816 at 2948.863 kb on - strand, within ECD_02816 at 2948.885 kb on + strand, within ECD_02816 at 2948.964 kb on - strand, within ECD_02816 at 2948.971 kb on + strand, within ECD_02816 at 2948.972 kb on - strand, within ECD_02816 at 2948.983 kb on - strand, within ECD_02816 at 2949.285 kb on + strand, within ECD_02816 at 2949.285 kb on + strand, within ECD_02816 at 2949.377 kb on - strand, within ECD_02816 at 2949.427 kb on - strand, within ECD_02816 at 2949.537 kb on + strand at 2949.562 kb on + strand at 2949.601 kb on + strand at 2949.627 kb on + strand at 2949.669 kb on + strand at 2949.716 kb on - strand, within ECD_02817 at 2949.728 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.886 kb on - strand, within ECD_02817 at 2949.889 kb on + strand, within ECD_02817 at 2949.889 kb on + strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.894 kb on + strand, within ECD_02817 at 2949.935 kb on + strand, within ECD_02817 at 2949.936 kb on - strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2950.046 kb on + strand, within ECD_02817 at 2950.050 kb on + strand, within ECD_02817 at 2950.101 kb on + strand, within ECD_02817 at 2950.101 kb on + strand, within ECD_02817 at 2950.138 kb on - strand, within ECD_02817 at 2950.141 kb on + strand, within ECD_02817 at 2950.142 kb on - strand, within ECD_02817 at 2950.142 kb on - strand, within ECD_02817
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 2,947,034 + ECD_02815 0.23 +0.0 2,947,121 - ECD_02815 0.31 -0.6 2,947,166 + ECD_02815 0.35 +0.4 2,947,178 - ECD_02815 0.36 -0.6 2,947,199 - ECD_02815 0.38 +0.0 2,947,258 + ECD_02815 0.43 -0.7 2,947,466 - ECD_02815 0.61 +0.1 2,947,520 + ECD_02815 0.66 -0.2 2,947,521 - ECD_02815 0.66 +0.3 2,947,521 - ECD_02815 0.66 +0.8 2,947,521 - ECD_02815 0.66 +0.0 2,947,559 - ECD_02815 0.70 +0.1 2,947,633 - ECD_02815 0.76 -0.5 2,947,639 + ECD_02815 0.77 +0.7 2,947,674 + ECD_02815 0.80 -0.3 2,947,731 + ECD_02815 0.85 -0.7 2,948,092 - +1.2 2,948,198 - ECD_02816 0.16 +0.0 2,948,198 - ECD_02816 0.16 +0.1 2,948,199 + ECD_02816 0.16 -0.1 2,948,399 - ECD_02816 0.28 -0.8 2,948,399 - ECD_02816 0.28 -0.3 2,948,399 - ECD_02816 0.28 -0.1 2,948,408 + ECD_02816 0.29 -0.6 2,948,435 - ECD_02816 0.30 -0.3 2,948,500 + ECD_02816 0.34 +0.8 2,948,501 - ECD_02816 0.34 -0.0 2,948,542 + ECD_02816 0.37 -0.0 2,948,542 + ECD_02816 0.37 -0.2 2,948,596 + ECD_02816 0.40 -0.2 2,948,677 - ECD_02816 0.45 +0.6 2,948,710 + ECD_02816 0.47 -1.3 2,948,793 + ECD_02816 0.52 -0.3 2,948,833 + ECD_02816 0.54 -0.4 2,948,834 - ECD_02816 0.54 -0.5 2,948,862 + ECD_02816 0.56 -0.7 2,948,863 - ECD_02816 0.56 +0.3 2,948,885 + ECD_02816 0.57 -0.1 2,948,964 - ECD_02816 0.62 +0.2 2,948,971 + ECD_02816 0.62 +0.2 2,948,972 - ECD_02816 0.62 -0.1 2,948,983 - ECD_02816 0.63 -3.5 2,949,285 + ECD_02816 0.81 -0.2 2,949,285 + ECD_02816 0.81 +0.2 2,949,377 - ECD_02816 0.86 -1.6 2,949,427 - ECD_02816 0.89 -0.2 2,949,537 + +0.0 2,949,562 + -0.4 2,949,601 + -0.1 2,949,627 + +0.1 2,949,669 + +0.1 2,949,716 - ECD_02817 0.14 -0.6 2,949,728 + ECD_02817 0.16 -0.2 2,949,870 + ECD_02817 0.35 -0.4 2,949,870 + ECD_02817 0.35 +0.9 2,949,870 + ECD_02817 0.35 +0.3 2,949,871 - ECD_02817 0.35 -0.5 2,949,871 - ECD_02817 0.35 +0.5 2,949,871 - ECD_02817 0.35 +0.3 2,949,885 + ECD_02817 0.37 +0.1 2,949,885 + ECD_02817 0.37 -0.5 2,949,885 + ECD_02817 0.37 +0.2 2,949,886 - ECD_02817 0.37 +0.3 2,949,889 + ECD_02817 0.37 +0.1 2,949,889 + ECD_02817 0.37 -0.3 2,949,890 - ECD_02817 0.37 +0.9 2,949,890 - ECD_02817 0.37 -0.4 2,949,890 - ECD_02817 0.37 +0.1 2,949,894 + ECD_02817 0.38 -1.1 2,949,935 + ECD_02817 0.43 -0.2 2,949,936 - ECD_02817 0.44 -1.1 2,949,947 + ECD_02817 0.45 -0.5 2,949,947 + ECD_02817 0.45 +0.3 2,949,947 + ECD_02817 0.45 -0.7 2,949,947 + ECD_02817 0.45 -0.8 2,950,046 + ECD_02817 0.58 -0.0 2,950,050 + ECD_02817 0.59 +1.0 2,950,101 + ECD_02817 0.66 -0.9 2,950,101 + ECD_02817 0.66 -0.0 2,950,138 - ECD_02817 0.71 -0.2 2,950,141 + ECD_02817 0.71 -0.3 2,950,142 - ECD_02817 0.71 -0.7 2,950,142 - ECD_02817 0.71 -0.3
Or see this region's nucleotide sequence