Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2985

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
3,575,118	+		Psyr_2982	0.33	-0.7
3,575,282	+		Psyr_2982	0.79	-0.0
3,575,282	+		Psyr_2982	0.79	+0.6
3,575,282	+		Psyr_2982	0.79	-2.7
3,575,282	+		Psyr_2982	0.79	-1.4
3,575,282	+		Psyr_2982	0.79	-2.3
3,575,283	-		Psyr_2982	0.80	+0.1
3,575,283	-		Psyr_2982	0.80	-2.1
3,575,283	-		Psyr_2982	0.80	+0.5
3,575,334	+				+0.0
3,575,334	+				-1.4
3,575,337	+				-1.5
3,575,337	+				-1.1
3,575,337	+				+0.2
3,575,338	-				+0.5
3,575,338	-				-0.3
3,575,369	+				-2.0
3,575,369	+				+0.2
3,575,370	-				+0.2
3,575,370	-				+1.6
3,575,379	-				+0.6
3,575,399	+				-0.0
3,575,399	+				+0.4
3,575,399	+				+1.5
3,575,400	-				+1.7
3,575,400	-				+1.2
3,575,400	-				+0.2
3,575,442	-				-0.5
3,575,442	-				+1.4
3,575,533	-				+0.7
3,575,533	-				+0.8
3,575,596	+		Psyr_2983	0.24	-2.3
3,575,654	+		Psyr_2983	0.43	-0.5
3,575,654	+		Psyr_2983	0.43	-0.8
3,575,654	+		Psyr_2983	0.43	-0.3
3,575,654	+		Psyr_2983	0.43	-2.6
3,575,654	+		Psyr_2983	0.43	+0.2
3,575,655	-		Psyr_2983	0.43	+1.5
3,575,655	-		Psyr_2983	0.43	+0.6
3,575,655	-		Psyr_2983	0.43	+0.4
3,575,655	-		Psyr_2983	0.43	+0.0
3,575,655	-		Psyr_2983	0.43	-1.4
3,575,655	-		Psyr_2983	0.43	+0.4
3,575,655	-		Psyr_2983	0.43	-1.8
3,575,655	-		Psyr_2983	0.43	-0.4
3,575,655	-		Psyr_2983	0.43	-1.2
3,575,655	-		Psyr_2983	0.43	+1.1
3,575,655	-		Psyr_2983	0.43	+0.4
3,575,884	+		Psyr_2984	0.23	+1.6
3,575,991	+		Psyr_2984	0.81	+2.2
3,575,991	+		Psyr_2984	0.81	-1.1
3,575,992	-		Psyr_2984	0.82	+0.6
3,575,992	-		Psyr_2984	0.82	-0.9
3,576,025	+				+3.5
3,576,025	+				-0.7
3,576,368	+		Psyr_2985	0.46	-0.7
3,576,368	+		Psyr_2985	0.46	-0.1
3,576,368	+		Psyr_2985	0.46	-0.4
3,576,451	-		Psyr_2985	0.59	-0.7
3,576,451	-		Psyr_2985	0.59	-1.3
3,576,493	+		Psyr_2985	0.65	-2.1
3,576,782	-				+0.8
3,576,782	-				-1.3
3,576,807	+				+1.2
3,576,807	+				-1.7
3,576,807	+				+0.2
3,576,808	-				-0.8
3,576,875	+				+0.0
3,576,876	-				+0.5
3,576,965	+		Psyr_2986	0.13	+1.1
3,576,965	+		Psyr_2986	0.13	+1.5
3,576,965	+		Psyr_2986	0.13	-0.5
3,576,965	+		Psyr_2986	0.13	+0.3
3,576,965	+		Psyr_2986	0.13	-0.9
3,576,966	-		Psyr_2986	0.13	+0.2
3,576,966	-		Psyr_2986	0.13	+1.2
3,576,966	-		Psyr_2986	0.13	+1.2
3,576,966	-		Psyr_2986	0.13	+0.6
3,577,181	+		Psyr_2986	0.24	+0.5
3,577,181	+		Psyr_2986	0.24	+0.9
3,577,181	+		Psyr_2986	0.24	-1.6
3,577,181	+		Psyr_2986	0.24	+0.6
3,577,182	-		Psyr_2986	0.25	+0.2
3,577,182	-		Psyr_2986	0.25	+0.2
3,577,182	-		Psyr_2986	0.25	+0.5
3,577,182	-		Psyr_2986	0.25	+2.7
3,577,384	+		Psyr_2986	0.36	-2.3
3,577,384	+		Psyr_2986	0.36	-0.1
3,577,384	+		Psyr_2986	0.36	+1.2
3,577,385	-		Psyr_2986	0.36	-0.2
3,577,385	-		Psyr_2986	0.36	+0.5
3,577,385	-		Psyr_2986	0.36	-1.6
3,577,610	+		Psyr_2986	0.48	-0.8
3,577,611	-		Psyr_2986	0.48	+0.3
3,577,643	+				+0.6
3,577,643	+		Psyr_2986	0.50	+0.4
3,577,643	+		Psyr_2986	0.50	-1.4
3,577,643	+		Psyr_2986	0.50	-1.4
3,577,644	-		Psyr_2986	0.50	+1.9
3,577,722	-		Psyr_2986	0.54	-1.7