Experiment: D(+)-Carvone 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3339 and Atu3340 overlap by 4 nucleotides Atu3340 and Atu3341 are separated by 10 nucleotides Atu3341 and Atu3342 are separated by 57 nucleotides Atu3342 and Atu3343 are separated by 6 nucleotides
Atu3339: Atu3339 - trehalose/maltose ABC transporter permease, at 373,807 to 374,781
Atu3339
Atu3340: Atu3340 - trehalose/maltose ABC transporter permease, at 374,778 to 375,611
Atu3340
Atu3341: Atu3341 - trehalose/maltose ABC transporter ATPase, at 375,622 to 376,650
Atu3341
Atu3342: Atu3342 - trehalose utilization-like protein, at 376,708 to 377,493
Atu3342
Atu3343: Atu3343 - trehalose utilization-like protein, at 377,500 to 378,549
Atu3343
Position (kb) 375
376
377 Strain fitness (log2 ratio) -1
0
1 at 374.622 kb on + strand, within Atu3339 at 374.622 kb on + strand, within Atu3339 at 374.630 kb on - strand, within Atu3339 at 374.630 kb on - strand, within Atu3339 at 374.774 kb on + strand at 374.818 kb on + strand at 374.868 kb on + strand, within Atu3340 at 374.868 kb on + strand, within Atu3340 at 375.057 kb on - strand, within Atu3340 at 375.103 kb on - strand, within Atu3340 at 375.232 kb on - strand, within Atu3340 at 375.301 kb on + strand, within Atu3340 at 375.309 kb on - strand, within Atu3340 at 375.316 kb on - strand, within Atu3340 at 375.347 kb on - strand, within Atu3340 at 375.364 kb on + strand, within Atu3340 at 375.364 kb on + strand, within Atu3340 at 375.372 kb on - strand, within Atu3340 at 375.372 kb on - strand, within Atu3340 at 375.426 kb on - strand, within Atu3340 at 375.577 kb on + strand at 375.577 kb on + strand at 375.626 kb on + strand at 375.665 kb on + strand at 375.665 kb on + strand at 375.756 kb on + strand, within Atu3341 at 375.885 kb on + strand, within Atu3341 at 375.981 kb on - strand, within Atu3341 at 375.987 kb on + strand, within Atu3341 at 375.998 kb on + strand, within Atu3341 at 376.006 kb on - strand, within Atu3341 at 376.073 kb on + strand, within Atu3341 at 376.081 kb on - strand, within Atu3341 at 376.201 kb on + strand, within Atu3341 at 376.203 kb on - strand, within Atu3341 at 376.206 kb on + strand, within Atu3341 at 376.230 kb on + strand, within Atu3341 at 376.630 kb on + strand at 376.729 kb on - strand at 376.799 kb on - strand, within Atu3342 at 376.833 kb on - strand, within Atu3342 at 376.859 kb on + strand, within Atu3342 at 376.944 kb on + strand, within Atu3342 at 376.984 kb on + strand, within Atu3342 at 376.985 kb on + strand, within Atu3342 at 376.998 kb on - strand, within Atu3342 at 377.163 kb on + strand, within Atu3342 at 377.171 kb on - strand, within Atu3342 at 377.228 kb on - strand, within Atu3342 at 377.307 kb on - strand, within Atu3342 at 377.393 kb on + strand, within Atu3342 at 377.459 kb on + strand at 377.461 kb on - strand at 377.461 kb on - strand at 377.490 kb on - strand at 377.618 kb on + strand, within Atu3343
Per-strain Table
Position Strand Gene LocusTag Fraction D(+)-Carvone 5 mM remove 374,622 + Atu3339 0.84 +0.0 374,622 + Atu3339 0.84 -0.4 374,630 - Atu3339 0.84 +0.1 374,630 - Atu3339 0.84 +1.2 374,774 + -0.9 374,818 + -0.1 374,868 + Atu3340 0.11 -0.7 374,868 + Atu3340 0.11 -0.7 375,057 - Atu3340 0.33 -0.1 375,103 - Atu3340 0.39 -0.4 375,232 - Atu3340 0.54 -0.4 375,301 + Atu3340 0.63 -0.5 375,309 - Atu3340 0.64 -0.5 375,316 - Atu3340 0.65 -0.4 375,347 - Atu3340 0.68 -0.8 375,364 + Atu3340 0.70 +0.3 375,364 + Atu3340 0.70 -0.2 375,372 - Atu3340 0.71 -0.8 375,372 - Atu3340 0.71 +0.1 375,426 - Atu3340 0.78 +0.5 375,577 + -0.4 375,577 + +0.0 375,626 + -1.7 375,665 + -0.3 375,665 + +0.7 375,756 + Atu3341 0.13 -0.6 375,885 + Atu3341 0.26 -0.3 375,981 - Atu3341 0.35 -1.2 375,987 + Atu3341 0.35 -0.8 375,998 + Atu3341 0.37 -0.6 376,006 - Atu3341 0.37 -1.2 376,073 + Atu3341 0.44 -0.4 376,081 - Atu3341 0.45 -1.5 376,201 + Atu3341 0.56 -0.6 376,203 - Atu3341 0.56 +0.1 376,206 + Atu3341 0.57 -0.4 376,230 + Atu3341 0.59 -0.3 376,630 + +0.6 376,729 - -0.3 376,799 - Atu3342 0.12 +0.2 376,833 - Atu3342 0.16 -0.6 376,859 + Atu3342 0.19 -0.0 376,944 + Atu3342 0.30 -0.3 376,984 + Atu3342 0.35 -0.7 376,985 + Atu3342 0.35 +0.3 376,998 - Atu3342 0.37 -1.4 377,163 + Atu3342 0.58 -1.2 377,171 - Atu3342 0.59 -0.7 377,228 - Atu3342 0.66 -1.6 377,307 - Atu3342 0.76 -0.7 377,393 + Atu3342 0.87 -0.6 377,459 + -0.6 377,461 - -0.8 377,461 - -0.4 377,490 - -0.3 377,618 + Atu3343 0.11 -0.0
Or see this region's nucleotide sequence