Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20620

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,522,407	-		AO353_20615	0.10	-1.4
4,522,407	-		AO353_20615	0.10	-1.2
4,522,408	+		AO353_20615	0.11	+0.1
4,522,408	+		AO353_20615	0.11	+1.7
4,522,408	+		AO353_20615	0.11	-0.3
4,522,408	+		AO353_20615	0.11	+3.3
4,522,408	+		AO353_20615	0.11	-0.3
4,522,408	+		AO353_20615	0.11	+2.1
4,522,408	+		AO353_20615	0.11	+1.4
4,522,408	+		AO353_20615	0.11	+0.8
4,522,408	+		AO353_20615	0.11	-1.9
4,522,408	+		AO353_20615	0.11	-0.0
4,522,408	+		AO353_20615	0.11	-2.0
4,522,408	+		AO353_20615	0.11	-1.5
4,522,408	+		AO353_20615	0.11	+0.4
4,522,408	+		AO353_20615	0.11	-1.5
4,522,409	-		AO353_20615	0.11	-0.7
4,522,409	-		AO353_20615	0.11	+0.4
4,522,409	-		AO353_20615	0.11	-1.7
4,522,409	-		AO353_20615	0.11	+0.7
4,522,409	-		AO353_20615	0.11	-0.6
4,522,409	-		AO353_20615	0.11	-0.1
4,522,409	-				-0.1
4,522,409	-		AO353_20615	0.11	-0.9
4,522,409	-		AO353_20615	0.11	-1.7
4,522,409	-		AO353_20615	0.11	+0.5
4,522,409	-		AO353_20615	0.11	+2.3
4,522,409	-		AO353_20615	0.11	-0.8
4,522,409	-		AO353_20615	0.11	-1.3
4,522,409	-		AO353_20615	0.11	+0.3
4,522,409	-		AO353_20615	0.11	-1.1
4,522,413	+		AO353_20615	0.11	-0.3
4,522,413	+		AO353_20615	0.11	-1.7
4,522,413	+		AO353_20615	0.11	-1.5
4,522,413	+		AO353_20615	0.11	-0.6
4,522,414	-		AO353_20615	0.11	-0.6
4,522,414	-		AO353_20615	0.11	-1.4
4,522,414	-		AO353_20615	0.11	-2.2
4,522,414	-		AO353_20615	0.11	-1.7
4,522,431	+		AO353_20615	0.13	-0.9
4,522,431	+		AO353_20615	0.13	-1.5
4,522,431	+		AO353_20615	0.13	-1.0
4,522,431	+		AO353_20615	0.13	-1.9
4,522,432	-		AO353_20615	0.13	-0.6
4,522,432	-		AO353_20615	0.13	-0.5
4,522,432	-				+3.3
4,522,432	-		AO353_20615	0.13	+0.7
4,522,523	+		AO353_20615	0.23	-1.1
4,522,524	-		AO353_20615	0.24	+1.7
4,522,524	-		AO353_20615	0.24	+2.7
4,522,524	-		AO353_20615	0.24	-1.3
4,522,534	+		AO353_20615	0.25	-0.9
4,522,534	+		AO353_20615	0.25	-1.9
4,522,534	+		AO353_20615	0.25	-0.3
4,522,535	-		AO353_20615	0.25	-0.9
4,522,535	-		AO353_20615	0.25	+1.7
4,522,535	-		AO353_20615	0.25	+0.1
4,522,538	+		AO353_20615	0.25	-0.4
4,522,538	+		AO353_20615	0.25	+1.1
4,522,538	+		AO353_20615	0.25	-0.7
4,522,538	+		AO353_20615	0.25	-1.7
4,522,538	+		AO353_20615	0.25	+2.7
4,522,538	+		AO353_20615	0.25	-1.1
4,522,538	+		AO353_20615	0.25	+0.1
4,522,538	+		AO353_20615	0.25	-1.2
4,522,538	+		AO353_20615	0.25	-0.4
4,522,538	+		AO353_20615	0.25	-1.5
4,522,539	-		AO353_20615	0.25	-0.8
4,522,539	-		AO353_20615	0.25	+1.1
4,522,539	-		AO353_20615	0.25	-0.5
4,522,539	-		AO353_20615	0.25	-0.5
4,522,539	-		AO353_20615	0.25	-0.2
4,522,539	-		AO353_20615	0.25	-0.4
4,522,539	-		AO353_20615	0.25	-0.7
4,522,539	-		AO353_20615	0.25	+0.7
4,522,539	-		AO353_20615	0.25	+1.1
4,522,539	-		AO353_20615	0.25	+1.3
4,522,539	-		AO353_20615	0.25	-0.4
4,522,539	-		AO353_20615	0.25	-2.1
4,522,539	-		AO353_20615	0.25	-1.9
4,522,539	-		AO353_20615	0.25	-1.2
4,522,604	+		AO353_20615	0.33	+0.7
4,522,807	+		AO353_20615	0.55	+1.5
4,522,888	-		AO353_20615	0.64	-2.2
4,523,070	+		AO353_20615	0.85	-0.9
4,523,070	+		AO353_20615	0.85	+1.9
4,523,070	+		AO353_20615	0.85	-1.5
4,523,070	+		AO353_20615	0.85	-0.6
4,523,070	+		AO353_20615	0.85	-0.2
4,523,070	+		AO353_20615	0.85	+0.6
4,523,071	-		AO353_20615	0.85	+0.3
4,523,071	-		AO353_20615	0.85	-2.1
4,523,071	-		AO353_20615	0.85	-1.5
4,523,071	-		AO353_20615	0.85	-0.6
4,523,100	-		AO353_20615	0.88	-1.6
4,523,175	+				-0.3
4,523,176	-				-1.5
4,523,176	-				-1.5
4,523,176	-				-1.6
4,523,177	+				-0.3
4,523,177	+				+1.4
4,523,177	+				-2.1
4,523,177	+				-0.7
4,523,177	+				+0.5
4,523,177	+				+0.8
4,523,178	-				-1.5
4,523,178	-				+2.4
4,523,178	-				-0.9
4,523,178	-				-0.3
4,523,178	-				-1.0
4,523,178	-				-0.0
4,523,264	-				-1.3
4,523,272	-				-1.5
4,523,272	-				+2.7
4,523,299	-				-0.9
4,523,326	+				-1.9
4,523,326	+				-1.5
4,523,326	+				+1.7
4,523,326	+				+0.7
4,523,326	+				-0.3
4,523,327	-				+1.7
4,523,372	+				+1.7
4,523,372	+				-2.2
4,523,432	+				+0.1
4,523,432	+				-0.3
4,523,432	+				-0.5
4,523,432	+				+0.1
4,523,432	+				-1.6
4,523,432	+				+0.1
4,523,433	-				+0.1
4,523,550	+		AO353_20620	0.14	-0.9
4,523,759	-		AO353_20620	0.29	+0.1
4,523,759	-				+0.1
4,523,915	-		AO353_20620	0.40	-1.6
4,524,092	+		AO353_20620	0.52	-1.3
4,524,092	+		AO353_20620	0.52	-0.7
4,524,092	+		AO353_20620	0.52	-0.9
4,524,092	+		AO353_20620	0.52	-0.3
4,524,092	+		AO353_20620	0.52	-0.9
4,524,093	-		AO353_20620	0.52	+1.1
4,524,093	-		AO353_20620	0.52	-1.9
4,524,093	-		AO353_20620	0.52	-0.6
4,524,341	+		AO353_20620	0.70	-0.3
4,524,341	+		AO353_20620	0.70	+0.7
4,524,341	+		AO353_20620	0.70	-2.3
4,524,341	+		AO353_20620	0.70	-1.1
4,524,341	+		AO353_20620	0.70	-2.5
4,524,342	-		AO353_20620	0.70	-1.5
4,524,342	-		AO353_20620	0.70	-2.1
4,524,342	-		AO353_20620	0.70	-0.5
4,524,342	-		AO353_20620	0.70	+1.7
4,524,342	-		AO353_20620	0.70	-3.0
4,524,662	-				-0.9
4,524,796	-				-1.5
4,525,088	-		AO353_20625	0.47	+0.7
4,525,117	+		AO353_20625	0.52	-1.5
4,525,127	+		AO353_20625	0.53	-2.4
4,525,127	+		AO353_20625	0.53	-2.6
4,525,127	+		AO353_20625	0.53	+1.1
4,525,127	+		AO353_20625	0.53	-1.5
4,525,127	+		AO353_20625	0.53	-1.1
4,525,127	+		AO353_20625	0.53	-2.6
4,525,128	-		AO353_20625	0.53	+0.1
4,525,128	-		AO353_20625	0.53	-0.3
4,525,128	-		AO353_20625	0.53	-0.3
4,525,128	-		AO353_20625	0.53	-2.7
4,525,128	-		AO353_20625	0.53	-1.6
4,525,128	-		AO353_20625	0.53	+1.7
4,525,436	+				-2.5
4,525,437	-				-0.1
4,525,437	-				-0.3
4,525,443	+				+0.3
4,525,501	+				-1.2
4,525,501	+				-0.3
4,525,501	+				-0.3
4,525,502	-				-0.3
4,525,502	-				-0.3
4,525,502	-				-1.9
4,525,502	-				+1.0
4,525,502	-				-1.3
4,525,502	-				+0.7
4,525,598	+				-1.3
4,525,598	+				-1.7
4,525,598	+				+0.7
4,525,598	+				+0.3
4,525,598	+				+0.1
4,525,598	+				-0.6
4,525,599	-				+1.1
4,525,599	-				-1.3
4,525,599	-				-1.3
4,525,601	+				+0.6
4,525,601	+				+0.7
4,525,601	+				+1.3
4,525,602	-				-1.9
4,525,602	-				-1.6
4,525,602	-				-0.8
4,525,602	-				-1.7
4,525,602	-				+0.7
4,525,602	-				-0.3
4,525,602	-				-0.9
4,525,649	+		AO353_20630	0.10	-0.8
4,525,649	+		AO353_20630	0.10	-1.2
4,525,649	+		AO353_20630	0.10	-0.6
4,525,650	-		AO353_20630	0.10	-0.9
4,525,650	-		AO353_20630	0.10	-0.7
4,525,650	-		AO353_20630	0.10	-0.9
4,525,650	-		AO353_20630	0.10	-1.5
4,525,679	+		AO353_20630	0.14	+1.7
4,525,679	+		AO353_20630	0.14	+0.6