Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3124
Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,299,861 | + | Psest_3123 | 0.22 | +2.6 | |
| 3,299,861 | + | Psest_3123 | 0.22 | +1.6 | |
| 3,300,108 | + | Psest_3123 | 0.45 | +1.6 | |
| 3,300,108 | + | Psest_3123 | 0.45 | +1.6 | |
| 3,300,431 | + | Psest_3123 | 0.76 | +1.6 | |
| 3,300,433 | + | Psest_3123 | 0.77 | +0.0 | |
| 3,300,434 | - | Psest_3123 | 0.77 | +1.6 | |
| 3,300,458 | + | Psest_3123 | 0.79 | +1.6 | |
| 3,300,458 | + | Psest_3123 | 0.79 | +1.6 | |
| 3,300,458 | + | Psest_3123 | 0.79 | +1.6 | |
| 3,300,459 | - | Psest_3123 | 0.79 | +2.6 | |
| 3,300,550 | + | Psest_3123 | 0.88 | +0.6 | |
| 3,301,016 | + | Psest_3124 | 0.51 | -0.7 | |
| 3,301,016 | + | Psest_3124 | 0.51 | -0.7 |
Or see this region's nucleotide sequence