Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02249 and MPMX20_02250 are separated by 203 nucleotides MPMX20_02250 and MPMX20_02251 are separated by 24 nucleotides
MPMX20_02249: MPMX20_02249 - hypothetical protein, at 2,360,930 to 2,362,033
_02249
MPMX20_02250: MPMX20_02250 - Aliphatic amidase expression-regulating protein, at 2,362,237 to 2,363,508
_02250
MPMX20_02251: MPMX20_02251 - hypothetical protein, at 2,363,533 to 2,365,107
_02251
Position (kb)
2362
2363
2364 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2361.242 kb on + strand, within MPMX20_02249 at 2361.430 kb on + strand, within MPMX20_02249 at 2361.606 kb on - strand, within MPMX20_02249 at 2361.611 kb on - strand, within MPMX20_02249 at 2361.705 kb on + strand, within MPMX20_02249 at 2361.934 kb on - strand at 2362.036 kb on - strand at 2362.047 kb on + strand at 2362.068 kb on + strand at 2362.071 kb on - strand at 2362.076 kb on - strand at 2362.081 kb on - strand at 2362.081 kb on - strand at 2362.157 kb on + strand at 2362.203 kb on + strand at 2362.203 kb on + strand at 2362.203 kb on + strand at 2362.203 kb on + strand at 2362.203 kb on + strand at 2362.211 kb on - strand at 2362.211 kb on - strand at 2362.290 kb on - strand at 2362.399 kb on - strand, within MPMX20_02250 at 2362.458 kb on + strand, within MPMX20_02250 at 2362.550 kb on + strand, within MPMX20_02250 at 2362.556 kb on + strand, within MPMX20_02250 at 2362.594 kb on - strand, within MPMX20_02250 at 2362.611 kb on + strand, within MPMX20_02250 at 2362.611 kb on + strand, within MPMX20_02250 at 2362.619 kb on - strand, within MPMX20_02250 at 2362.619 kb on - strand, within MPMX20_02250 at 2362.626 kb on + strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.634 kb on - strand, within MPMX20_02250 at 2362.641 kb on + strand, within MPMX20_02250 at 2362.646 kb on + strand, within MPMX20_02250 at 2362.720 kb on + strand, within MPMX20_02250 at 2362.728 kb on - strand, within MPMX20_02250 at 2362.842 kb on + strand, within MPMX20_02250 at 2362.842 kb on + strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.850 kb on - strand, within MPMX20_02250 at 2362.887 kb on - strand, within MPMX20_02250 at 2362.914 kb on - strand, within MPMX20_02250 at 2363.016 kb on - strand, within MPMX20_02250 at 2363.040 kb on + strand, within MPMX20_02250 at 2363.059 kb on - strand, within MPMX20_02250 at 2363.143 kb on + strand, within MPMX20_02250 at 2363.143 kb on + strand, within MPMX20_02250 at 2363.151 kb on - strand, within MPMX20_02250 at 2363.234 kb on - strand, within MPMX20_02250 at 2363.328 kb on + strand, within MPMX20_02250 at 2363.405 kb on - strand at 2363.439 kb on + strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.447 kb on - strand at 2363.522 kb on + strand at 2363.580 kb on + strand at 2363.669 kb on - strand at 2363.671 kb on - strand at 2363.697 kb on + strand, within MPMX20_02251 at 2363.803 kb on + strand, within MPMX20_02251 at 2363.803 kb on + strand, within MPMX20_02251 at 2363.816 kb on - strand, within MPMX20_02251 at 2363.821 kb on + strand, within MPMX20_02251 at 2364.073 kb on - strand, within MPMX20_02251 at 2364.073 kb on - strand, within MPMX20_02251 at 2364.176 kb on + strand, within MPMX20_02251 at 2364.254 kb on - strand, within MPMX20_02251 at 2364.256 kb on - strand, within MPMX20_02251 at 2364.256 kb on - strand, within MPMX20_02251 at 2364.276 kb on - strand, within MPMX20_02251 at 2364.361 kb on - strand, within MPMX20_02251 at 2364.394 kb on - strand, within MPMX20_02251 at 2364.402 kb on + strand, within MPMX20_02251 at 2364.407 kb on + strand, within MPMX20_02251 at 2364.450 kb on + strand, within MPMX20_02251
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 2,361,242 + MPMX20_02249 0.28 -0.1 2,361,430 + MPMX20_02249 0.45 +0.2 2,361,606 - MPMX20_02249 0.61 +0.4 2,361,611 - MPMX20_02249 0.62 +0.2 2,361,705 + MPMX20_02249 0.70 -0.7 2,361,934 - -0.9 2,362,036 - -1.0 2,362,047 + -1.5 2,362,068 + -1.7 2,362,071 - -0.8 2,362,076 - -0.5 2,362,081 - -2.2 2,362,081 - -0.5 2,362,157 + -0.8 2,362,203 + -0.7 2,362,203 + -1.0 2,362,203 + -1.3 2,362,203 + +0.7 2,362,203 + -0.6 2,362,211 - -2.2 2,362,211 - -1.4 2,362,290 - -3.7 2,362,399 - MPMX20_02250 0.13 -2.9 2,362,458 + MPMX20_02250 0.17 -2.7 2,362,550 + MPMX20_02250 0.25 -1.0 2,362,556 + MPMX20_02250 0.25 -2.3 2,362,594 - MPMX20_02250 0.28 -2.7 2,362,611 + MPMX20_02250 0.29 -3.1 2,362,611 + MPMX20_02250 0.29 -1.8 2,362,619 - MPMX20_02250 0.30 -1.9 2,362,619 - MPMX20_02250 0.30 -3.3 2,362,626 + MPMX20_02250 0.31 -1.2 2,362,634 - MPMX20_02250 0.31 -2.8 2,362,634 - MPMX20_02250 0.31 -0.2 2,362,634 - MPMX20_02250 0.31 -3.7 2,362,634 - MPMX20_02250 0.31 -1.1 2,362,634 - MPMX20_02250 0.31 -2.0 2,362,641 + MPMX20_02250 0.32 -0.6 2,362,646 + MPMX20_02250 0.32 -1.5 2,362,720 + MPMX20_02250 0.38 -3.9 2,362,728 - MPMX20_02250 0.39 +0.1 2,362,842 + MPMX20_02250 0.48 -3.1 2,362,842 + MPMX20_02250 0.48 -0.8 2,362,850 - MPMX20_02250 0.48 -2.2 2,362,850 - MPMX20_02250 0.48 -1.8 2,362,850 - MPMX20_02250 0.48 -0.6 2,362,887 - MPMX20_02250 0.51 -4.4 2,362,914 - MPMX20_02250 0.53 -0.1 2,363,016 - MPMX20_02250 0.61 +0.5 2,363,040 + MPMX20_02250 0.63 -3.4 2,363,059 - MPMX20_02250 0.65 -1.5 2,363,143 + MPMX20_02250 0.71 -0.1 2,363,143 + MPMX20_02250 0.71 -2.8 2,363,151 - MPMX20_02250 0.72 -1.9 2,363,234 - MPMX20_02250 0.78 +1.5 2,363,328 + MPMX20_02250 0.86 -3.3 2,363,405 - -0.6 2,363,439 + +0.5 2,363,447 - -0.9 2,363,447 - -3.6 2,363,447 - -2.1 2,363,447 - -1.8 2,363,522 + +0.0 2,363,580 + -0.8 2,363,669 - -1.7 2,363,671 - +1.5 2,363,697 + MPMX20_02251 0.10 -2.9 2,363,803 + MPMX20_02251 0.17 -4.1 2,363,803 + MPMX20_02251 0.17 -0.7 2,363,816 - MPMX20_02251 0.18 -1.5 2,363,821 + MPMX20_02251 0.18 -2.0 2,364,073 - MPMX20_02251 0.34 -2.2 2,364,073 - MPMX20_02251 0.34 -4.2 2,364,176 + MPMX20_02251 0.41 -1.8 2,364,254 - MPMX20_02251 0.46 -0.1 2,364,256 - MPMX20_02251 0.46 -3.2 2,364,256 - MPMX20_02251 0.46 -0.4 2,364,276 - MPMX20_02251 0.47 -1.3 2,364,361 - MPMX20_02251 0.53 -2.6 2,364,394 - MPMX20_02251 0.55 -2.1 2,364,402 + MPMX20_02251 0.55 -1.7 2,364,407 + MPMX20_02251 0.55 -2.1 2,364,450 + MPMX20_02251 0.58 -1.8
Or see this region's nucleotide sequence