Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01666 and MPMX20_01667 are separated by 153 nucleotides MPMX20_01667 and MPMX20_01668 are separated by 192 nucleotides MPMX20_01668 and MPMX20_01669 are separated by 4 nucleotides
MPMX20_01666: MPMX20_01666 - Oxamate amidohydrolase proenzyme, at 1,764,027 to 1,765,610
_01666
MPMX20_01667: MPMX20_01667 - hypothetical protein, at 1,765,764 to 1,766,603
_01667
MPMX20_01668: MPMX20_01668 - L-cystine-binding protein FliY, at 1,766,796 to 1,767,578
_01668
MPMX20_01669: MPMX20_01669 - putative glutamine ABC transporter permease protein GlnM, at 1,767,583 to 1,768,248
_01669
Position (kb)
1765
1766
1767 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1764.796 kb on + strand, within MPMX20_01666 at 1764.820 kb on - strand, within MPMX20_01666 at 1764.864 kb on + strand, within MPMX20_01666 at 1764.872 kb on - strand, within MPMX20_01666 at 1764.943 kb on + strand, within MPMX20_01666 at 1765.038 kb on - strand, within MPMX20_01666 at 1765.040 kb on - strand, within MPMX20_01666 at 1765.047 kb on + strand, within MPMX20_01666 at 1765.130 kb on + strand, within MPMX20_01666 at 1765.266 kb on - strand, within MPMX20_01666 at 1765.313 kb on - strand, within MPMX20_01666 at 1765.371 kb on - strand, within MPMX20_01666 at 1765.375 kb on - strand, within MPMX20_01666 at 1765.456 kb on + strand at 1765.476 kb on - strand at 1765.539 kb on + strand at 1765.547 kb on - strand at 1765.770 kb on - strand at 1765.812 kb on + strand at 1765.819 kb on + strand at 1765.819 kb on + strand at 1765.874 kb on - strand, within MPMX20_01667 at 1765.876 kb on + strand, within MPMX20_01667 at 1765.892 kb on + strand, within MPMX20_01667 at 1765.900 kb on - strand, within MPMX20_01667 at 1765.904 kb on + strand, within MPMX20_01667 at 1765.943 kb on - strand, within MPMX20_01667 at 1765.952 kb on + strand, within MPMX20_01667 at 1765.959 kb on - strand, within MPMX20_01667 at 1765.971 kb on + strand, within MPMX20_01667 at 1765.989 kb on - strand, within MPMX20_01667 at 1766.030 kb on + strand, within MPMX20_01667 at 1766.035 kb on + strand, within MPMX20_01667 at 1766.038 kb on - strand, within MPMX20_01667 at 1766.038 kb on - strand, within MPMX20_01667 at 1766.095 kb on - strand, within MPMX20_01667 at 1766.103 kb on + strand, within MPMX20_01667 at 1766.129 kb on - strand, within MPMX20_01667 at 1766.168 kb on + strand, within MPMX20_01667 at 1766.176 kb on - strand, within MPMX20_01667 at 1766.442 kb on + strand, within MPMX20_01667 at 1766.442 kb on + strand, within MPMX20_01667 at 1766.450 kb on - strand, within MPMX20_01667 at 1766.465 kb on + strand, within MPMX20_01667 at 1766.504 kb on + strand, within MPMX20_01667 at 1766.587 kb on + strand at 1766.587 kb on + strand at 1766.595 kb on - strand at 1766.819 kb on + strand at 1766.827 kb on - strand at 1766.827 kb on - strand at 1766.893 kb on - strand, within MPMX20_01668 at 1766.936 kb on + strand, within MPMX20_01668 at 1766.941 kb on + strand, within MPMX20_01668 at 1766.949 kb on - strand, within MPMX20_01668 at 1766.949 kb on - strand, within MPMX20_01668 at 1767.010 kb on + strand, within MPMX20_01668 at 1767.082 kb on + strand, within MPMX20_01668 at 1767.183 kb on - strand, within MPMX20_01668 at 1767.183 kb on - strand, within MPMX20_01668 at 1767.195 kb on + strand, within MPMX20_01668 at 1767.201 kb on - strand, within MPMX20_01668 at 1767.244 kb on + strand, within MPMX20_01668 at 1767.245 kb on - strand, within MPMX20_01668 at 1767.249 kb on + strand, within MPMX20_01668 at 1767.249 kb on + strand, within MPMX20_01668 at 1767.252 kb on - strand, within MPMX20_01668 at 1767.304 kb on + strand, within MPMX20_01668 at 1767.312 kb on - strand, within MPMX20_01668 at 1767.335 kb on + strand, within MPMX20_01668 at 1767.343 kb on - strand, within MPMX20_01668 at 1767.405 kb on + strand, within MPMX20_01668 at 1767.528 kb on - strand at 1767.529 kb on + strand at 1767.537 kb on - strand at 1767.565 kb on + strand at 1767.573 kb on - strand at 1767.573 kb on - strand at 1767.579 kb on + strand at 1767.579 kb on + strand at 1767.587 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 1,764,796 + MPMX20_01666 0.49 +0.4 1,764,820 - MPMX20_01666 0.50 -0.9 1,764,864 + MPMX20_01666 0.53 +0.7 1,764,872 - MPMX20_01666 0.53 -1.0 1,764,943 + MPMX20_01666 0.58 +1.4 1,765,038 - MPMX20_01666 0.64 +0.3 1,765,040 - MPMX20_01666 0.64 -0.5 1,765,047 + MPMX20_01666 0.64 +1.6 1,765,130 + MPMX20_01666 0.70 +0.0 1,765,266 - MPMX20_01666 0.78 -1.3 1,765,313 - MPMX20_01666 0.81 +0.1 1,765,371 - MPMX20_01666 0.85 +1.3 1,765,375 - MPMX20_01666 0.85 +1.8 1,765,456 + -0.0 1,765,476 - -0.4 1,765,539 + +0.7 1,765,547 - +0.3 1,765,770 - +0.3 1,765,812 + +1.2 1,765,819 + +1.0 1,765,819 + +2.3 1,765,874 - MPMX20_01667 0.13 +2.0 1,765,876 + MPMX20_01667 0.13 -0.5 1,765,892 + MPMX20_01667 0.15 -0.2 1,765,900 - MPMX20_01667 0.16 +0.8 1,765,904 + MPMX20_01667 0.17 +0.7 1,765,943 - MPMX20_01667 0.21 +1.2 1,765,952 + MPMX20_01667 0.22 +0.9 1,765,959 - MPMX20_01667 0.23 +1.2 1,765,971 + MPMX20_01667 0.25 -0.1 1,765,989 - MPMX20_01667 0.27 +3.2 1,766,030 + MPMX20_01667 0.32 +2.0 1,766,035 + MPMX20_01667 0.32 +1.3 1,766,038 - MPMX20_01667 0.33 +0.5 1,766,038 - MPMX20_01667 0.33 +0.9 1,766,095 - MPMX20_01667 0.39 -2.3 1,766,103 + MPMX20_01667 0.40 +1.3 1,766,129 - MPMX20_01667 0.43 +1.9 1,766,168 + MPMX20_01667 0.48 +1.2 1,766,176 - MPMX20_01667 0.49 +0.5 1,766,442 + MPMX20_01667 0.81 +2.0 1,766,442 + MPMX20_01667 0.81 +1.8 1,766,450 - MPMX20_01667 0.82 +0.7 1,766,465 + MPMX20_01667 0.83 +0.4 1,766,504 + MPMX20_01667 0.88 +1.2 1,766,587 + +0.5 1,766,587 + +0.1 1,766,595 - +0.8 1,766,819 + -0.0 1,766,827 - -1.8 1,766,827 - -2.0 1,766,893 - MPMX20_01668 0.12 +0.0 1,766,936 + MPMX20_01668 0.18 -1.8 1,766,941 + MPMX20_01668 0.19 -0.8 1,766,949 - MPMX20_01668 0.20 -1.3 1,766,949 - MPMX20_01668 0.20 +1.5 1,767,010 + MPMX20_01668 0.27 +0.2 1,767,082 + MPMX20_01668 0.37 -1.3 1,767,183 - MPMX20_01668 0.49 -1.3 1,767,183 - MPMX20_01668 0.49 +0.9 1,767,195 + MPMX20_01668 0.51 +0.2 1,767,201 - MPMX20_01668 0.52 -0.3 1,767,244 + MPMX20_01668 0.57 -1.5 1,767,245 - MPMX20_01668 0.57 -0.4 1,767,249 + MPMX20_01668 0.58 +0.6 1,767,249 + MPMX20_01668 0.58 +2.1 1,767,252 - MPMX20_01668 0.58 +0.1 1,767,304 + MPMX20_01668 0.65 -1.9 1,767,312 - MPMX20_01668 0.66 -0.8 1,767,335 + MPMX20_01668 0.69 +0.3 1,767,343 - MPMX20_01668 0.70 +0.9 1,767,405 + MPMX20_01668 0.78 -1.1 1,767,528 - +0.2 1,767,529 + -0.4 1,767,537 - +0.2 1,767,565 + -1.0 1,767,573 - +1.0 1,767,573 - +0.5 1,767,579 + +0.1 1,767,579 + -1.3 1,767,587 - -1.0
Or see this region's nucleotide sequence