Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02897

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02895 and MPMX20_02896 overlap by 4 nucleotidesMPMX20_02896 and MPMX20_02897 are separated by 3 nucleotidesMPMX20_02897 and MPMX20_02898 overlap by 4 nucleotidesMPMX20_02898 and MPMX20_02899 are separated by 471 nucleotides MPMX20_02895: MPMX20_02895 - hypothetical protein, at 3,043,674 to 3,044,060 _02895 MPMX20_02896: MPMX20_02896 - Lysozyme RrrD, at 3,044,057 to 3,044,497 _02896 MPMX20_02897: MPMX20_02897 - hypothetical protein, at 3,044,501 to 3,044,776 _02897 MPMX20_02898: MPMX20_02898 - hypothetical protein, at 3,044,773 to 3,045,174 _02898 MPMX20_02899: MPMX20_02899 - hypothetical protein, at 3,045,646 to 3,046,335 _02899 Position (kb) 3044 3045Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3043.504 kb on - strandat 3043.509 kb on - strandat 3043.531 kb on + strandat 3043.569 kb on + strandat 3043.579 kb on + strandat 3043.579 kb on + strandat 3043.587 kb on + strandat 3043.587 kb on - strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.590 kb on + strandat 3043.595 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.598 kb on - strandat 3043.672 kb on + strandat 3043.672 kb on + strandat 3043.673 kb on - strandat 3043.724 kb on + strand, within MPMX20_02895at 3043.794 kb on + strand, within MPMX20_02895at 3043.836 kb on - strand, within MPMX20_02895at 3043.907 kb on + strand, within MPMX20_02895at 3043.907 kb on + strand, within MPMX20_02895at 3043.915 kb on - strand, within MPMX20_02895at 3043.921 kb on + strand, within MPMX20_02895at 3043.921 kb on + strand, within MPMX20_02895at 3043.929 kb on - strand, within MPMX20_02895at 3043.929 kb on - strand, within MPMX20_02895at 3043.934 kb on - strand, within MPMX20_02895at 3043.949 kb on - strand, within MPMX20_02895at 3043.972 kb on + strand, within MPMX20_02895at 3044.046 kb on - strandat 3044.063 kb on - strandat 3044.071 kb on - strandat 3044.113 kb on - strand, within MPMX20_02896at 3044.118 kb on - strand, within MPMX20_02896at 3044.133 kb on - strand, within MPMX20_02896at 3044.256 kb on + strand, within MPMX20_02896at 3044.262 kb on - strand, within MPMX20_02896at 3044.266 kb on + strand, within MPMX20_02896at 3044.296 kb on + strand, within MPMX20_02896at 3044.311 kb on - strand, within MPMX20_02896at 3044.329 kb on + strand, within MPMX20_02896at 3044.349 kb on + strand, within MPMX20_02896at 3044.364 kb on - strand, within MPMX20_02896at 3044.372 kb on - strand, within MPMX20_02896at 3044.396 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.416 kb on + strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.424 kb on - strand, within MPMX20_02896at 3044.426 kb on + strand, within MPMX20_02896at 3044.426 kb on + strand, within MPMX20_02896at 3044.426 kb on + strand, within MPMX20_02896at 3044.426 kb on + strand, within MPMX20_02896at 3044.426 kb on - strand, within MPMX20_02896at 3044.434 kb on - strand, within MPMX20_02896at 3044.434 kb on - strand, within MPMX20_02896at 3044.434 kb on - strand, within MPMX20_02896at 3044.434 kb on - strand, within MPMX20_02896at 3044.451 kb on + strand, within MPMX20_02896at 3044.503 kb on + strandat 3044.506 kb on - strandat 3044.536 kb on - strand, within MPMX20_02897at 3044.594 kb on - strand, within MPMX20_02897at 3044.594 kb on - strand, within MPMX20_02897at 3044.657 kb on + strand, within MPMX20_02897at 3044.657 kb on + strand, within MPMX20_02897at 3044.660 kb on - strand, within MPMX20_02897at 3044.665 kb on - strand, within MPMX20_02897at 3044.665 kb on - strand, within MPMX20_02897at 3044.665 kb on - strand, within MPMX20_02897at 3044.670 kb on + strand, within MPMX20_02897at 3044.784 kb on - strandat 3044.801 kb on - strandat 3044.801 kb on - strandat 3044.887 kb on - strand, within MPMX20_02898at 3044.889 kb on + strand, within MPMX20_02898at 3044.897 kb on - strand, within MPMX20_02898at 3044.897 kb on - strand, within MPMX20_02898at 3044.897 kb on - strand, within MPMX20_02898at 3044.966 kb on + strand, within MPMX20_02898at 3044.966 kb on + strand, within MPMX20_02898at 3044.968 kb on + strand, within MPMX20_02898at 3044.974 kb on - strand, within MPMX20_02898at 3045.002 kb on + strand, within MPMX20_02898at 3045.010 kb on - strand, within MPMX20_02898at 3045.013 kb on + strand, within MPMX20_02898at 3045.038 kb on - strand, within MPMX20_02898at 3045.038 kb on - strand, within MPMX20_02898at 3045.045 kb on - strand, within MPMX20_02898at 3045.046 kb on + strand, within MPMX20_02898at 3045.046 kb on + strand, within MPMX20_02898at 3045.054 kb on - strand, within MPMX20_02898at 3045.054 kb on - strand, within MPMX20_02898at 3045.054 kb on - strand, within MPMX20_02898at 3045.054 kb on - strand, within MPMX20_02898at 3045.078 kb on - strand, within MPMX20_02898at 3045.114 kb on + strand, within MPMX20_02898at 3045.115 kb on + strand, within MPMX20_02898at 3045.122 kb on - strand, within MPMX20_02898at 3045.122 kb on - strand, within MPMX20_02898at 3045.156 kb on - strandat 3045.156 kb on - strandat 3045.195 kb on + strandat 3045.195 kb on + strandat 3045.203 kb on - strandat 3045.283 kb on + strandat 3045.355 kb on - strandat 3045.406 kb on + strandat 3045.412 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.509 kb on - strandat 3045.509 kb on - strandat 3045.509 kb on - strandat 3045.514 kb on - strandat 3045.556 kb on + strandat 3045.563 kb on + strandat 3045.736 kb on - strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.746 kb on - strand, within MPMX20_02899

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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3,043,504 - +2.7
3,043,509 - +1.9
3,043,531 + +3.1
3,043,569 + +2.0
3,043,579 + +2.0
3,043,579 + +3.2
3,043,587 + -0.3
3,043,587 - +0.8
3,043,590 + +1.1
3,043,590 + +2.2
3,043,590 + +2.9
3,043,590 + -0.4
3,043,590 + +3.1
3,043,590 + +2.5
3,043,590 + +2.8
3,043,590 + +2.5
3,043,590 + +3.2
3,043,590 + +2.1
3,043,590 + +1.8
3,043,595 - +1.1
3,043,598 - +2.3
3,043,598 - +0.8
3,043,598 - +1.0
3,043,598 - +1.1
3,043,598 - -1.5
3,043,598 - +1.4
3,043,598 - +3.0
3,043,598 - +0.3
3,043,598 - +2.3
3,043,598 - +2.0
3,043,598 - +1.4
3,043,598 - +2.3
3,043,672 + +0.8
3,043,672 + +4.0
3,043,673 - +2.0
3,043,724 + MPMX20_02895 0.13 +2.2
3,043,794 + MPMX20_02895 0.31 +1.7
3,043,836 - MPMX20_02895 0.42 -1.1
3,043,907 + MPMX20_02895 0.60 +2.6
3,043,907 + MPMX20_02895 0.60 +0.1
3,043,915 - MPMX20_02895 0.62 +1.3
3,043,921 + MPMX20_02895 0.64 +1.7
3,043,921 + MPMX20_02895 0.64 +1.6
3,043,929 - MPMX20_02895 0.66 -1.8
3,043,929 - MPMX20_02895 0.66 +1.9
3,043,934 - MPMX20_02895 0.67 +2.4
3,043,949 - MPMX20_02895 0.71 +0.1
3,043,972 + MPMX20_02895 0.77 +1.5
3,044,046 - +3.0
3,044,063 - +1.8
3,044,071 - +5.4
3,044,113 - MPMX20_02896 0.13 +1.8
3,044,118 - MPMX20_02896 0.14 -2.2
3,044,133 - MPMX20_02896 0.17 +1.7
3,044,256 + MPMX20_02896 0.45 +1.2
3,044,262 - MPMX20_02896 0.46 +2.5
3,044,266 + MPMX20_02896 0.47 +1.6
3,044,296 + MPMX20_02896 0.54 +1.7
3,044,311 - MPMX20_02896 0.58 +1.8
3,044,329 + MPMX20_02896 0.62 +1.5
3,044,349 + MPMX20_02896 0.66 +4.5
3,044,364 - MPMX20_02896 0.70 +1.8
3,044,372 - MPMX20_02896 0.71 +3.1
3,044,396 + MPMX20_02896 0.77 +0.8
3,044,416 + MPMX20_02896 0.81 +4.4
3,044,416 + MPMX20_02896 0.81 +1.7
3,044,416 + MPMX20_02896 0.81 -0.6
3,044,416 + MPMX20_02896 0.81 +2.3
3,044,416 + MPMX20_02896 0.81 +1.9
3,044,416 + MPMX20_02896 0.81 +1.1
3,044,424 - MPMX20_02896 0.83 +2.0
3,044,424 - MPMX20_02896 0.83 +2.6
3,044,424 - MPMX20_02896 0.83 +3.5
3,044,424 - MPMX20_02896 0.83 +3.7
3,044,424 - MPMX20_02896 0.83 +0.1
3,044,424 - MPMX20_02896 0.83 +3.2
3,044,424 - MPMX20_02896 0.83 +1.5
3,044,426 + MPMX20_02896 0.84 +2.7
3,044,426 + MPMX20_02896 0.84 +2.7
3,044,426 + MPMX20_02896 0.84 +0.8
3,044,426 + MPMX20_02896 0.84 +1.8
3,044,426 - MPMX20_02896 0.84 +1.8
3,044,434 - MPMX20_02896 0.85 +1.7
3,044,434 - MPMX20_02896 0.85 +2.6
3,044,434 - MPMX20_02896 0.85 +1.2
3,044,434 - MPMX20_02896 0.85 -0.5
3,044,451 + MPMX20_02896 0.89 +2.5
3,044,503 + +0.0
3,044,506 - +3.0
3,044,536 - MPMX20_02897 0.13 -2.5
3,044,594 - MPMX20_02897 0.34 +0.5
3,044,594 - MPMX20_02897 0.34 +0.3
3,044,657 + MPMX20_02897 0.57 +2.6
3,044,657 + MPMX20_02897 0.57 +1.2
3,044,660 - MPMX20_02897 0.58 +0.4
3,044,665 - MPMX20_02897 0.59 +0.3
3,044,665 - MPMX20_02897 0.59 +3.3
3,044,665 - MPMX20_02897 0.59 +0.8
3,044,670 + MPMX20_02897 0.61 +1.3
3,044,784 - +1.5
3,044,801 - +3.3
3,044,801 - -2.1
3,044,887 - MPMX20_02898 0.28 +2.6
3,044,889 + MPMX20_02898 0.29 +3.7
3,044,897 - MPMX20_02898 0.31 +2.9
3,044,897 - MPMX20_02898 0.31 +1.6
3,044,897 - MPMX20_02898 0.31 +2.3
3,044,966 + MPMX20_02898 0.48 +0.5
3,044,966 + MPMX20_02898 0.48 +3.2
3,044,968 + MPMX20_02898 0.49 +1.4
3,044,974 - MPMX20_02898 0.50 +3.3
3,045,002 + MPMX20_02898 0.57 +2.8
3,045,010 - MPMX20_02898 0.59 +0.1
3,045,013 + MPMX20_02898 0.60 +1.2
3,045,038 - MPMX20_02898 0.66 +2.9
3,045,038 - MPMX20_02898 0.66 +1.6
3,045,045 - MPMX20_02898 0.68 +2.5
3,045,046 + MPMX20_02898 0.68 +2.2
3,045,046 + MPMX20_02898 0.68 +1.6
3,045,054 - MPMX20_02898 0.70 +0.3
3,045,054 - MPMX20_02898 0.70 +0.9
3,045,054 - MPMX20_02898 0.70 +0.7
3,045,054 - MPMX20_02898 0.70 +2.1
3,045,078 - MPMX20_02898 0.76 -1.1
3,045,114 + MPMX20_02898 0.85 +1.6
3,045,115 + MPMX20_02898 0.85 +1.6
3,045,122 - MPMX20_02898 0.87 +3.3
3,045,122 - MPMX20_02898 0.87 +2.7
3,045,156 - +1.7
3,045,156 - +2.4
3,045,195 + +3.5
3,045,195 + +1.3
3,045,203 - +1.6
3,045,283 + +3.9
3,045,355 - +1.4
3,045,406 + +0.7
3,045,412 + +0.4
3,045,491 + +2.6
3,045,491 + -0.6
3,045,491 + +2.0
3,045,491 + +1.9
3,045,491 + +0.3
3,045,491 + +3.2
3,045,491 + +2.9
3,045,491 + +1.5
3,045,491 + +2.7
3,045,491 + +1.4
3,045,491 + +2.5
3,045,491 + +2.5
3,045,491 + +2.7
3,045,499 - +2.3
3,045,499 - +2.1
3,045,499 - +4.5
3,045,499 - +3.3
3,045,501 + +2.7
3,045,501 + +2.4
3,045,501 + +3.2
3,045,501 + +2.3
3,045,501 + +2.4
3,045,501 + -1.2
3,045,509 - +1.7
3,045,509 - +4.4
3,045,509 - +2.9
3,045,514 - +1.7
3,045,556 + +0.4
3,045,563 + +4.1
3,045,736 - MPMX20_02899 0.13 +1.2
3,045,738 + MPMX20_02899 0.13 +0.9
3,045,738 + MPMX20_02899 0.13 +1.7
3,045,738 + MPMX20_02899 0.13 +0.2
3,045,746 - MPMX20_02899 0.14 +1.5

Or see this region's nucleotide sequence