Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04758 and MPMX20_04759 are separated by 424 nucleotides MPMX20_04759 and MPMX20_04760 overlap by 50 nucleotides MPMX20_04760 and MPMX20_04761 are separated by 24 nucleotides
MPMX20_04758: MPMX20_04758 - hypothetical protein, at 107,407 to 108,471
_04758
MPMX20_04759: MPMX20_04759 - IS3 family transposase ISYen3, at 108,896 to 109,153
_04759
MPMX20_04760: MPMX20_04760 - IS3 family transposase ISRaq1, at 109,104 to 109,793
_04760
MPMX20_04761: MPMX20_04761 - IS3 family transposase IS1222, at 109,818 to 109,997
_04761
Position (kb)
108
109
110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 107.896 kb on + strand, within MPMX20_04758 at 107.908 kb on + strand, within MPMX20_04758 at 107.927 kb on + strand, within MPMX20_04758 at 107.929 kb on + strand, within MPMX20_04758 at 107.929 kb on + strand, within MPMX20_04758 at 107.937 kb on - strand, within MPMX20_04758 at 107.957 kb on + strand, within MPMX20_04758 at 107.966 kb on + strand, within MPMX20_04758 at 108.005 kb on - strand, within MPMX20_04758 at 108.017 kb on - strand, within MPMX20_04758 at 108.023 kb on + strand, within MPMX20_04758 at 108.024 kb on + strand, within MPMX20_04758 at 108.032 kb on - strand, within MPMX20_04758 at 108.037 kb on - strand, within MPMX20_04758 at 108.041 kb on + strand, within MPMX20_04758 at 108.077 kb on - strand, within MPMX20_04758 at 108.077 kb on - strand, within MPMX20_04758 at 108.077 kb on - strand, within MPMX20_04758 at 108.091 kb on + strand, within MPMX20_04758 at 108.122 kb on - strand, within MPMX20_04758 at 108.151 kb on + strand, within MPMX20_04758 at 108.151 kb on + strand, within MPMX20_04758 at 108.159 kb on - strand, within MPMX20_04758 at 108.168 kb on - strand, within MPMX20_04758 at 108.168 kb on - strand, within MPMX20_04758 at 108.173 kb on + strand, within MPMX20_04758 at 108.178 kb on + strand, within MPMX20_04758 at 108.183 kb on + strand, within MPMX20_04758 at 108.183 kb on + strand, within MPMX20_04758 at 108.186 kb on - strand, within MPMX20_04758 at 108.188 kb on - strand, within MPMX20_04758 at 108.188 kb on - strand, within MPMX20_04758 at 108.234 kb on + strand, within MPMX20_04758 at 108.255 kb on - strand, within MPMX20_04758 at 108.280 kb on + strand, within MPMX20_04758 at 108.280 kb on + strand, within MPMX20_04758 at 108.287 kb on - strand, within MPMX20_04758 at 108.298 kb on + strand, within MPMX20_04758 at 108.317 kb on + strand, within MPMX20_04758 at 108.317 kb on + strand, within MPMX20_04758 at 108.317 kb on + strand, within MPMX20_04758 at 108.325 kb on - strand, within MPMX20_04758 at 108.325 kb on - strand, within MPMX20_04758 at 108.325 kb on - strand, within MPMX20_04758 at 108.329 kb on - strand, within MPMX20_04758 at 108.338 kb on + strand, within MPMX20_04758 at 108.362 kb on + strand, within MPMX20_04758 at 108.373 kb on - strand at 108.373 kb on - strand at 108.373 kb on - strand at 108.383 kb on - strand at 108.401 kb on - strand at 108.405 kb on + strand at 108.406 kb on - strand at 108.415 kb on + strand at 108.451 kb on + strand at 108.472 kb on - strand at 108.500 kb on + strand at 108.508 kb on - strand at 108.534 kb on + strand at 108.542 kb on - strand at 108.591 kb on + strand at 108.596 kb on + strand at 108.596 kb on + strand at 108.597 kb on - strand at 108.604 kb on - strand at 108.604 kb on - strand at 108.648 kb on + strand at 108.648 kb on + strand at 108.648 kb on + strand at 108.653 kb on + strand at 108.654 kb on - strand at 108.656 kb on - strand at 108.674 kb on - strand at 108.696 kb on + strand at 108.708 kb on + strand at 108.708 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.718 kb on + strand at 108.721 kb on - strand at 108.721 kb on - strand at 108.726 kb on - strand at 108.726 kb on - strand at 108.726 kb on - strand at 108.726 kb on - strand at 108.726 kb on - strand at 108.726 kb on - strand at 108.745 kb on - strand at 108.762 kb on - strand at 108.767 kb on + strand at 108.774 kb on + strand at 108.781 kb on + strand at 108.799 kb on + strand at 108.817 kb on - strand at 108.827 kb on + strand at 108.827 kb on + strand at 108.827 kb on + strand at 108.827 kb on + strand at 108.828 kb on + strand at 108.835 kb on - strand at 108.835 kb on - strand at 108.835 kb on - strand at 108.835 kb on - strand at 108.835 kb on - strand at 108.863 kb on - strand at 108.863 kb on - strand at 108.868 kb on + strand at 108.880 kb on + strand at 108.880 kb on + strand at 108.880 kb on + strand at 108.888 kb on - strand at 108.888 kb on - strand at 108.893 kb on + strand at 108.935 kb on - strand, within MPMX20_04759 at 108.935 kb on - strand, within MPMX20_04759 at 108.947 kb on - strand, within MPMX20_04759 at 109.045 kb on - strand, within MPMX20_04759 at 109.072 kb on + strand, within MPMX20_04759 at 109.080 kb on - strand, within MPMX20_04759 at 109.095 kb on + strand, within MPMX20_04759 at 109.110 kb on + strand at 109.142 kb on + strand at 109.142 kb on + strand at 109.142 kb on + strand at 109.142 kb on + strand at 109.150 kb on - strand at 109.150 kb on - strand at 109.150 kb on - strand at 109.152 kb on + strand at 109.154 kb on + strand at 109.162 kb on - strand at 109.169 kb on - strand at 109.169 kb on - strand at 109.193 kb on - strand, within MPMX20_04760 at 109.246 kb on - strand, within MPMX20_04760 at 109.256 kb on - strand, within MPMX20_04760 at 109.258 kb on + strand, within MPMX20_04760 at 109.261 kb on - strand, within MPMX20_04760 at 109.298 kb on + strand, within MPMX20_04760 at 109.330 kb on - strand, within MPMX20_04760 at 109.330 kb on - strand, within MPMX20_04760 at 109.332 kb on + strand, within MPMX20_04760 at 109.411 kb on + strand, within MPMX20_04760 at 109.469 kb on + strand, within MPMX20_04760 at 109.510 kb on + strand, within MPMX20_04760 at 109.510 kb on + strand, within MPMX20_04760 at 109.523 kb on + strand, within MPMX20_04760 at 109.526 kb on + strand, within MPMX20_04760 at 109.581 kb on + strand, within MPMX20_04760 at 109.586 kb on + strand, within MPMX20_04760 at 109.606 kb on - strand, within MPMX20_04760 at 109.616 kb on - strand, within MPMX20_04760 at 109.639 kb on - strand, within MPMX20_04760 at 109.648 kb on + strand, within MPMX20_04760 at 109.672 kb on - strand, within MPMX20_04760 at 109.710 kb on + strand, within MPMX20_04760 at 109.718 kb on - strand, within MPMX20_04760 at 109.731 kb on + strand at 109.739 kb on - strand at 109.739 kb on - strand at 109.743 kb on + strand at 109.777 kb on - strand at 109.811 kb on + strand at 109.829 kb on - strand at 109.849 kb on + strand, within MPMX20_04761 at 109.865 kb on + strand, within MPMX20_04761 at 109.873 kb on + strand, within MPMX20_04761 at 109.873 kb on - strand, within MPMX20_04761 at 109.873 kb on - strand, within MPMX20_04761 at 109.873 kb on - strand, within MPMX20_04761 at 109.894 kb on + strand, within MPMX20_04761 at 109.902 kb on - strand, within MPMX20_04761 at 109.925 kb on - strand, within MPMX20_04761 at 109.937 kb on - strand, within MPMX20_04761 at 109.937 kb on - strand, within MPMX20_04761 at 109.963 kb on + strand, within MPMX20_04761 at 110.004 kb on + strand at 110.004 kb on + strand at 110.004 kb on + strand at 110.009 kb on + strand at 110.012 kb on - strand at 110.012 kb on - strand at 110.012 kb on - strand at 110.014 kb on + strand at 110.022 kb on - strand at 110.022 kb on - strand at 110.044 kb on + strand at 110.044 kb on + strand at 110.044 kb on + strand at 110.044 kb on + strand at 110.044 kb on + strand at 110.044 kb on + strand at 110.052 kb on - strand at 110.052 kb on - strand at 110.052 kb on - strand at 110.054 kb on + strand at 110.057 kb on - strand at 110.062 kb on - strand at 110.064 kb on + strand at 110.064 kb on + strand at 110.065 kb on - strand at 110.067 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.072 kb on - strand at 110.079 kb on + strand at 110.081 kb on + strand at 110.081 kb on + strand at 110.081 kb on + strand at 110.099 kb on - strand at 110.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 107,896 + MPMX20_04758 0.46 -0.2 107,908 + MPMX20_04758 0.47 -0.4 107,927 + MPMX20_04758 0.49 +1.6 107,929 + MPMX20_04758 0.49 +1.0 107,929 + MPMX20_04758 0.49 +1.3 107,937 - MPMX20_04758 0.50 -0.5 107,957 + MPMX20_04758 0.52 -0.6 107,966 + MPMX20_04758 0.52 -0.9 108,005 - MPMX20_04758 0.56 -1.0 108,017 - MPMX20_04758 0.57 -1.2 108,023 + MPMX20_04758 0.58 -0.3 108,024 + MPMX20_04758 0.58 -0.0 108,032 - MPMX20_04758 0.59 -0.1 108,037 - MPMX20_04758 0.59 -2.4 108,041 + MPMX20_04758 0.60 -0.0 108,077 - MPMX20_04758 0.63 -0.3 108,077 - MPMX20_04758 0.63 -0.9 108,077 - MPMX20_04758 0.63 -0.5 108,091 + MPMX20_04758 0.64 -1.5 108,122 - MPMX20_04758 0.67 -0.9 108,151 + MPMX20_04758 0.70 +1.6 108,151 + MPMX20_04758 0.70 -0.3 108,159 - MPMX20_04758 0.71 -0.1 108,168 - MPMX20_04758 0.71 -0.2 108,168 - MPMX20_04758 0.71 -0.5 108,173 + MPMX20_04758 0.72 +1.0 108,178 + MPMX20_04758 0.72 -0.8 108,183 + MPMX20_04758 0.73 -1.2 108,183 + MPMX20_04758 0.73 +0.3 108,186 - MPMX20_04758 0.73 +2.0 108,188 - MPMX20_04758 0.73 -1.8 108,188 - MPMX20_04758 0.73 +1.2 108,234 + MPMX20_04758 0.78 +0.1 108,255 - MPMX20_04758 0.80 +0.3 108,280 + MPMX20_04758 0.82 -0.1 108,280 + MPMX20_04758 0.82 +0.5 108,287 - MPMX20_04758 0.83 -2.5 108,298 + MPMX20_04758 0.84 +0.6 108,317 + MPMX20_04758 0.85 -0.3 108,317 + MPMX20_04758 0.85 -1.3 108,317 + MPMX20_04758 0.85 -1.2 108,325 - MPMX20_04758 0.86 +1.0 108,325 - MPMX20_04758 0.86 +1.6 108,325 - MPMX20_04758 0.86 -0.2 108,329 - MPMX20_04758 0.87 -0.6 108,338 + MPMX20_04758 0.87 -0.4 108,362 + MPMX20_04758 0.90 +0.8 108,373 - -0.3 108,373 - +0.1 108,373 - +1.6 108,383 - -0.4 108,401 - +0.7 108,405 + +0.2 108,406 - +0.1 108,415 + +0.6 108,451 + +2.8 108,472 - -0.5 108,500 + +3.2 108,508 - +1.8 108,534 + -1.2 108,542 - +1.8 108,591 + +1.0 108,596 + +0.6 108,596 + -1.3 108,597 - +0.6 108,604 - +0.2 108,604 - -1.6 108,648 + -0.2 108,648 + -1.3 108,648 + +0.6 108,653 + +0.7 108,654 - +0.8 108,656 - -0.6 108,674 - +3.0 108,696 + +1.2 108,708 + -0.7 108,708 + -1.5 108,718 + +0.3 108,718 + -1.3 108,718 + -0.6 108,718 + -1.0 108,718 + +0.1 108,718 + +2.2 108,718 + -0.7 108,718 + +0.9 108,721 - +0.4 108,721 - +0.6 108,726 - -0.3 108,726 - -0.7 108,726 - -0.3 108,726 - -1.4 108,726 - -0.6 108,726 - +2.6 108,745 - -0.5 108,762 - +1.0 108,767 + +1.6 108,774 + +0.9 108,781 + -0.8 108,799 + -0.1 108,817 - -1.1 108,827 + +0.1 108,827 + -0.4 108,827 + -1.8 108,827 + -1.1 108,828 + +3.6 108,835 - -0.0 108,835 - -0.6 108,835 - -0.8 108,835 - -1.1 108,835 - -0.0 108,863 - +1.9 108,863 - -0.2 108,868 + +0.1 108,880 + -1.3 108,880 + +1.1 108,880 + -0.4 108,888 - -0.0 108,888 - -0.9 108,893 + +0.1 108,935 - MPMX20_04759 0.15 -0.9 108,935 - MPMX20_04759 0.15 -3.2 108,947 - MPMX20_04759 0.20 +0.7 109,045 - MPMX20_04759 0.58 -1.0 109,072 + MPMX20_04759 0.68 -0.6 109,080 - MPMX20_04759 0.71 -1.3 109,095 + MPMX20_04759 0.77 -1.4 109,110 + +0.6 109,142 + +1.2 109,142 + +0.6 109,142 + -0.5 109,142 + -0.5 109,150 - -0.9 109,150 - -1.6 109,150 - +1.7 109,152 + +2.6 109,154 + -0.9 109,162 - +0.1 109,169 - +2.4 109,169 - -0.7 109,193 - MPMX20_04760 0.13 -0.7 109,246 - MPMX20_04760 0.21 -0.6 109,256 - MPMX20_04760 0.22 +0.2 109,258 + MPMX20_04760 0.22 +0.2 109,261 - MPMX20_04760 0.23 -0.0 109,298 + MPMX20_04760 0.28 +0.3 109,330 - MPMX20_04760 0.33 -0.9 109,330 - MPMX20_04760 0.33 -1.1 109,332 + MPMX20_04760 0.33 +0.5 109,411 + MPMX20_04760 0.44 -1.1 109,469 + MPMX20_04760 0.53 +2.6 109,510 + MPMX20_04760 0.59 -2.6 109,510 + MPMX20_04760 0.59 +1.1 109,523 + MPMX20_04760 0.61 -0.6 109,526 + MPMX20_04760 0.61 +0.1 109,581 + MPMX20_04760 0.69 +0.9 109,586 + MPMX20_04760 0.70 +0.6 109,606 - MPMX20_04760 0.73 +1.3 109,616 - MPMX20_04760 0.74 -0.2 109,639 - MPMX20_04760 0.78 -0.4 109,648 + MPMX20_04760 0.79 -0.1 109,672 - MPMX20_04760 0.82 -0.7 109,710 + MPMX20_04760 0.88 +1.0 109,718 - MPMX20_04760 0.89 -0.2 109,731 + +1.5 109,739 - -0.0 109,739 - -0.8 109,743 + +1.3 109,777 - +1.7 109,811 + +0.9 109,829 - -1.3 109,849 + MPMX20_04761 0.17 -0.1 109,865 + MPMX20_04761 0.26 +0.3 109,873 + MPMX20_04761 0.31 +0.3 109,873 - MPMX20_04761 0.31 +2.2 109,873 - MPMX20_04761 0.31 +0.9 109,873 - MPMX20_04761 0.31 -0.9 109,894 + MPMX20_04761 0.42 +1.3 109,902 - MPMX20_04761 0.47 -0.2 109,925 - MPMX20_04761 0.59 -0.4 109,937 - MPMX20_04761 0.66 -0.7 109,937 - MPMX20_04761 0.66 -0.0 109,963 + MPMX20_04761 0.81 -0.5 110,004 + -0.2 110,004 + -0.0 110,004 + -1.3 110,009 + +0.1 110,012 - -2.1 110,012 - +1.0 110,012 - -0.5 110,014 + -1.7 110,022 - +1.3 110,022 - -1.4 110,044 + -0.2 110,044 + -1.8 110,044 + +0.4 110,044 + -0.0 110,044 + -0.0 110,044 + +0.1 110,052 - -2.1 110,052 - +0.4 110,052 - -0.3 110,054 + -0.4 110,057 - +2.6 110,062 - +2.0 110,064 + -0.7 110,064 + -1.3 110,065 - -0.2 110,067 - -1.4 110,072 - -0.0 110,072 - +2.6 110,072 - +0.7 110,072 - +1.1 110,072 - +0.5 110,072 - -1.0 110,072 - +1.8 110,079 + +0.6 110,081 + -1.5 110,081 + +0.6 110,081 + -2.1 110,099 - +2.0 110,122 - -0.6
Or see this region's nucleotide sequence