Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02313 and ECD_02314 are separated by 184 nucleotides ECD_02314 and ECD_02315 are separated by 383 nucleotides ECD_02315 and ECD_02316 are separated by 44 nucleotides
ECD_02313: ECD_02313 - sulfate transporter, sulfite inhibited, at 2,403,850 to 2,404,611
_02313
ECD_02314: ECD_02314 - cysteine synthase A, O-acetylserine sulfhydrolase A subunit, at 2,404,796 to 2,405,767
_02314
ECD_02315: ECD_02315 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr), at 2,406,151 to 2,406,408
_02315
ECD_02316: ECD_02316 - PEP-protein phosphotransferase of PTS system (enzyme I), at 2,406,453 to 2,408,180
_02316
Position (kb)
2404
2405
2406 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2403.892 kb on + strand at 2404.055 kb on + strand, within ECD_02313 at 2404.055 kb on + strand, within ECD_02313 at 2404.055 kb on + strand, within ECD_02313 at 2404.118 kb on - strand, within ECD_02313 at 2404.137 kb on + strand, within ECD_02313 at 2404.166 kb on + strand, within ECD_02313 at 2404.304 kb on + strand, within ECD_02313 at 2404.304 kb on + strand, within ECD_02313 at 2404.371 kb on + strand, within ECD_02313 at 2404.396 kb on + strand, within ECD_02313 at 2404.405 kb on + strand, within ECD_02313 at 2404.476 kb on + strand, within ECD_02313 at 2404.525 kb on - strand, within ECD_02313 at 2404.537 kb on - strand at 2404.709 kb on + strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.718 kb on + strand at 2404.719 kb on - strand at 2404.719 kb on - strand at 2404.726 kb on + strand at 2404.778 kb on + strand at 2404.784 kb on + strand at 2404.801 kb on + strand at 2405.030 kb on + strand, within ECD_02314 at 2405.030 kb on + strand, within ECD_02314 at 2405.031 kb on - strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.086 kb on + strand, within ECD_02314 at 2405.087 kb on - strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.391 kb on + strand, within ECD_02314 at 2405.391 kb on + strand, within ECD_02314 at 2405.455 kb on + strand, within ECD_02314 at 2405.596 kb on + strand, within ECD_02314 at 2405.608 kb on + strand, within ECD_02314 at 2405.609 kb on - strand, within ECD_02314 at 2405.715 kb on + strand at 2405.887 kb on + strand at 2406.032 kb on + strand at 2406.079 kb on + strand at 2406.112 kb on + strand at 2406.126 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,403,892 + -0.1 2,404,055 + ECD_02313 0.27 -0.3 2,404,055 + ECD_02313 0.27 -3.0 2,404,055 + ECD_02313 0.27 -0.2 2,404,118 - ECD_02313 0.35 -0.1 2,404,137 + ECD_02313 0.38 -0.2 2,404,166 + ECD_02313 0.41 +0.6 2,404,304 + ECD_02313 0.60 +0.9 2,404,304 + ECD_02313 0.60 +0.6 2,404,371 + ECD_02313 0.68 +0.0 2,404,396 + ECD_02313 0.72 +0.7 2,404,405 + ECD_02313 0.73 +0.3 2,404,476 + ECD_02313 0.82 -0.6 2,404,525 - ECD_02313 0.89 +0.1 2,404,537 - -0.3 2,404,709 + +0.2 2,404,710 - -0.8 2,404,710 - -1.6 2,404,710 - +0.1 2,404,710 - -0.7 2,404,710 - -3.5 2,404,718 + -0.3 2,404,719 - -1.3 2,404,719 - -1.0 2,404,726 + +0.6 2,404,778 + -0.7 2,404,784 + -2.5 2,404,801 + -3.6 2,405,030 + ECD_02314 0.24 -1.9 2,405,030 + ECD_02314 0.24 -2.7 2,405,031 - ECD_02314 0.24 -1.6 2,405,034 + ECD_02314 0.24 -3.3 2,405,034 + ECD_02314 0.24 -3.3 2,405,034 + ECD_02314 0.24 -2.8 2,405,086 + ECD_02314 0.30 -0.2 2,405,087 - ECD_02314 0.30 -0.8 2,405,389 + ECD_02314 0.61 -0.7 2,405,389 + ECD_02314 0.61 -5.7 2,405,389 + ECD_02314 0.61 -1.6 2,405,391 + ECD_02314 0.61 -0.9 2,405,391 + ECD_02314 0.61 -2.3 2,405,455 + ECD_02314 0.68 -1.9 2,405,596 + ECD_02314 0.82 -2.0 2,405,608 + ECD_02314 0.84 -0.9 2,405,609 - ECD_02314 0.84 -0.6 2,405,715 + -0.6 2,405,887 + -2.0 2,406,032 + +0.3 2,406,079 + +1.2 2,406,112 + -0.1 2,406,126 + -0.3
Or see this region's nucleotide sequence