Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24155 and BWI76_RS24160 are separated by 27 nucleotides BWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotides
BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998
_RS24155
BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301
_RS24160
BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434
_RS24165
Position (kb) 5037
5038 Strain fitness (log2 ratio) -2
-1
0
1 at 5036.181 kb on - strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.291 kb on + strand, within BWI76_RS24155 at 5036.299 kb on - strand, within BWI76_RS24155 at 5036.386 kb on + strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.491 kb on + strand, within BWI76_RS24155 at 5037.006 kb on - strand at 5037.137 kb on + strand, within BWI76_RS24160 at 5037.296 kb on + strand at 5037.435 kb on - strand at 5037.585 kb on + strand, within BWI76_RS24165 at 5037.697 kb on - strand at 5037.698 kb on - strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5038.068 kb on + strand, within BWI76_RS24165 at 5038.076 kb on - strand, within BWI76_RS24165 at 5038.190 kb on + strand, within BWI76_RS24165 at 5038.198 kb on - strand, within BWI76_RS24165 at 5038.222 kb on - strand, within BWI76_RS24165 at 5038.296 kb on + strand, within BWI76_RS24165
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 5,036,181 - BWI76_RS24155 0.23 -0.2 5,036,212 + BWI76_RS24155 0.26 +0.2 5,036,212 + BWI76_RS24155 0.26 -1.8 5,036,291 + BWI76_RS24155 0.33 +0.3 5,036,299 - BWI76_RS24155 0.34 +0.4 5,036,386 + BWI76_RS24155 0.42 +0.8 5,036,394 - BWI76_RS24155 0.43 +0.1 5,036,394 - BWI76_RS24155 0.43 +0.3 5,036,491 + BWI76_RS24155 0.52 +0.4 5,037,006 - +0.4 5,037,137 + BWI76_RS24160 0.40 -0.4 5,037,296 + -1.3 5,037,435 - +1.2 5,037,585 + BWI76_RS24165 0.22 +0.2 5,037,697 - -0.4 5,037,698 - BWI76_RS24165 0.32 -1.2 5,037,884 + BWI76_RS24165 0.49 +0.2 5,037,884 + BWI76_RS24165 0.49 +0.1 5,037,892 - BWI76_RS24165 0.50 +0.2 5,037,892 - BWI76_RS24165 0.50 +0.2 5,037,892 - BWI76_RS24165 0.50 -1.4 5,037,892 - BWI76_RS24165 0.50 +0.3 5,037,892 - BWI76_RS24165 0.50 +0.2 5,038,068 + BWI76_RS24165 0.66 +1.2 5,038,076 - BWI76_RS24165 0.67 +1.4 5,038,190 + BWI76_RS24165 0.77 +0.2 5,038,198 - BWI76_RS24165 0.78 +1.5 5,038,222 - BWI76_RS24165 0.80 +0.4 5,038,296 + BWI76_RS24165 0.87 +0.7
Or see this region's nucleotide sequence