Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2431

Experiment: KB with Methanol 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Methanol 5 vol%
2,812,178	-				+0.1
2,812,205	+				+0.6
2,812,205	+				-0.2
2,812,205	+				+0.2
2,812,205	+				+0.3
2,812,206	-				-0.4
2,812,206	-				+2.6
2,812,256	+				-0.0
2,812,268	+				+1.0
2,812,319	+		Psyr_2430	0.13	-0.7
2,812,319	+		Psyr_2430	0.13	-0.4
2,812,320	-		Psyr_2430	0.13	+0.1
2,812,479	-		Psyr_2430	0.53	-1.0
2,812,570	+		Psyr_2430	0.76	+0.3
2,812,571	-		Psyr_2430	0.76	-1.0
2,812,571	-		Psyr_2430	0.76	-2.8
2,812,571	-		Psyr_2430	0.76	-1.2
2,812,571	-		Psyr_2430	0.76	+0.8
2,812,616	+		Psyr_2430	0.87	-1.2
2,812,617	-		Psyr_2430	0.88	+0.1
2,812,617	-		Psyr_2430	0.88	+1.5
2,812,666	-				-1.1
2,812,682	-				-0.9
2,812,701	+				-0.1
2,812,701	+				+0.3
2,812,701	+				-1.0
2,812,702	-				-0.1
2,812,702	-				-1.5
2,812,738	-				-0.5
2,812,762	-				-1.1
2,812,769	-				+0.3
2,812,870	+				+0.6
2,812,870	+				-0.6
2,812,871	-				-0.2
2,812,875	+				+1.6
2,812,924	+				+0.2
2,813,033	-				-0.1
2,813,554	+		Psyr_2431	0.52	+0.0
2,813,554	+		Psyr_2431	0.52	-1.0
2,813,555	-		Psyr_2431	0.52	-0.4
2,813,555	-		Psyr_2431	0.52	-0.4
2,813,555	-		Psyr_2431	0.52	-0.8
2,813,555	-		Psyr_2431	0.52	+1.1
2,813,685	+		Psyr_2431	0.64	-0.6
2,813,698	+		Psyr_2431	0.65	+0.5
2,813,725	+		Psyr_2431	0.67	-2.5
2,813,803	-		Psyr_2431	0.74	+0.2
2,813,906	+		Psyr_2431	0.83	-1.4
2,814,025	+				-1.4
2,814,031	+				-2.3
2,814,031	+				-3.0
2,814,031	+				-0.9
2,814,032	-				+1.2
2,814,032	-				+0.1
2,814,032	-				-1.0
2,814,162	-				-1.1
2,814,268	+				+1.5
2,814,348	+				+0.3
2,814,349	-				-0.1
2,814,541	+				-0.2
2,814,542	-				+0.1
2,814,542	-				+0.2
2,814,542	-				-0.4
2,814,542	-				-0.4
2,814,566	+				+0.4
2,814,567	-				-1.5
2,814,567	-				+0.3
2,814,770	-		Psyr_2432	0.16	-0.9
2,814,772	+		Psyr_2432	0.17	+0.7
2,814,773	-		Psyr_2432	0.17	-0.8
2,814,845	+		Psyr_2432	0.19	+1.0
2,814,845	+		Psyr_2432	0.19	-0.8
2,814,845	+		Psyr_2432	0.19	-0.1
2,814,845	+		Psyr_2432	0.19	-1.0
2,814,846	-		Psyr_2432	0.19	-0.0
2,814,846	-		Psyr_2432	0.19	-0.4
2,814,846	-		Psyr_2432	0.19	-0.2
2,814,846	-		Psyr_2432	0.19	+4.2
2,814,857	+		Psyr_2432	0.19	+0.9
2,814,858	-		Psyr_2432	0.20	+0.4
2,814,858	-		Psyr_2432	0.20	+0.6
2,814,884	+		Psyr_2432	0.20	-2.1
2,814,885	-		Psyr_2432	0.20	-0.5
2,814,890	+		Psyr_2432	0.21	-1.0
2,814,890	+		Psyr_2432	0.21	+0.6
2,814,891	-		Psyr_2432	0.21	-0.4
2,814,893	+		Psyr_2432	0.21	-0.4
2,814,893	+		Psyr_2432	0.21	-0.3
2,814,894	-		Psyr_2432	0.21	-1.4
2,814,894	-		Psyr_2432	0.21	-0.5
2,814,894	-		Psyr_2432	0.21	+0.4
2,814,894	-		Psyr_2432	0.21	+0.0
2,815,049	+		Psyr_2432	0.26	-0.5
2,815,065	+		Psyr_2432	0.27	+0.4
2,815,066	-		Psyr_2432	0.27	+0.1