Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1825

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,101,354	+				+1.6
2,101,356	+				-1.2
2,101,356	+				-0.4
2,101,357	-				-2.2
2,101,357	-				-1.2
2,101,358	+				-0.2
2,101,358	+				+2.5
2,101,359	-				-0.8
2,101,362	+				-0.2
2,101,362	+				+0.2
2,101,363	-				-0.0
2,101,363	-				+0.6
2,101,363	-				+0.2
2,101,468	+				+0.1
2,101,468	+				+1.1
2,101,469	-				+1.6
2,101,469	-				+1.3
2,101,469	-				-2.0
2,101,473	+				-0.9
2,101,473	+				+0.6
2,101,473	+				-0.8
2,101,474	-				-1.0
2,101,474	-				+0.3
2,101,474	-				-0.2
2,101,474	-				-0.8
2,101,474	-				+1.1
2,101,474	-				+0.3
2,101,476	+				+1.6
2,101,476	+				-0.8
2,101,476	+				-0.4
2,101,476	+				+0.1
2,101,477	-				-0.4
2,101,533	+				-0.0
2,101,534	-				-0.4
2,101,534	-				-0.1
2,101,703	-				+1.6
2,101,721	+				-1.1
2,101,721	+				-1.2
2,101,721	+				-1.4
2,101,722	-				-1.2
2,101,722	-				+0.4
2,101,722	-				-0.3
2,101,732	+				-0.4
2,101,732	+				+0.6
2,101,732	+				-1.4
2,101,732	+				-1.0
2,101,732	+				+1.8
2,101,732	+				+0.2
2,101,733	-				-0.6
2,101,752	-				-0.7
2,101,752	-				+0.4
2,101,781	+				+2.1
2,101,782	-				-1.8
2,101,782	-				+0.1
2,101,782	-				+0.6
2,101,782	-				-0.8
2,101,791	+				+1.6
2,101,791	+				-0.2
2,101,792	-				+0.0
2,101,792	-				+1.1
2,101,792	-				-0.9
2,101,792	-				+0.7
2,101,792	-				+1.0
2,101,792	-				+1.5
2,101,792	-				+0.8
2,101,793	+				-0.2
2,101,793	+				-2.4
2,101,793	+				+0.3
2,101,793	+				-0.2
2,101,793	+				-0.5
2,101,793	+				-0.9
2,101,794	-				+1.2
2,101,794	-				+1.2
2,101,794	-				+0.6
2,101,794	-				-0.9
2,101,794	-				+0.3
2,101,794	-				+0.3
2,101,804	+				-0.2
2,101,804	+				-0.6
2,101,805	-				+0.6
2,101,881	+		Pf1N1B4_1824	0.22	+1.2
2,102,125	+				-0.4
2,102,125	+				+0.7
2,102,125	+				-1.8
2,102,125	+				+1.1
2,102,126	-				+0.2
2,102,126	-				-1.5
2,102,126	-				-0.4
2,102,126	-				+0.3
2,102,126	-				-2.2
2,102,126	-				-0.8
2,102,155	+				+0.2
2,102,155	+				+1.0
2,102,267	+				+0.3
2,102,267	+				+0.1
2,102,267	+				-2.6
2,102,267	+				+3.4
2,102,268	-				+0.2
2,102,268	-				-1.6
2,102,268	-				+0.6
2,102,334	+				+0.3
2,102,334	+				+1.7
2,102,334	+				+1.1
2,102,334	+				+0.4
2,102,334	+				+0.3
2,102,334	+				+0.6
2,102,334	+				+1.9
2,102,335	-				+1.0
2,102,366	+				+0.3
2,102,367	-				-2.3
2,102,505	-		Pf1N1B4_1825	0.49	-0.9
2,102,664	+				+1.6
2,102,664	+				-1.0
2,102,664	+				+0.3
2,102,664	+				+0.9
2,102,665	-				+0.8
2,102,665	-				+0.6
2,102,668	+				-1.8
2,102,700	+				-0.2
2,102,779	-		Pf1N1B4_1826	0.26	+0.2
2,103,088	+				-0.5
2,103,089	-				-0.8
2,103,459	-		Pf1N1B4_1827	0.23	+0.4
2,103,571	-		Pf1N1B4_1827	0.28	-0.3
2,103,634	-		Pf1N1B4_1827	0.32	-0.4