Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3521 and Psest_3522 are separated by 115 nucleotides Psest_3522 and Psest_3523 are separated by 113 nucleotides Psest_3523 and Psest_3524 overlap by 1 nucleotides
Psest_3521: Psest_3521 - H+/gluconate symporter and related permeases, at 3,700,757 to 3,702,148
_3521
Psest_3522: Psest_3522 - 3-hydroxybutyrate dehydrogenase, at 3,702,264 to 3,703,034
_3522
Psest_3523: Psest_3523 - putative thymidine phosphorylase, at 3,703,148 to 3,704,728
_3523
Psest_3524: Psest_3524 - ribose-phosphate pyrophosphokinase, at 3,704,728 to 3,705,624
_3524
Position (kb)
3703
3704
3705 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.118 kb on + strand at 3703.225 kb on + strand at 3703.226 kb on - strand at 3703.248 kb on - strand at 3704.317 kb on - strand, within Psest_3523 at 3704.619 kb on - strand at 3704.746 kb on + strand at 3704.747 kb on - strand at 3704.747 kb on - strand at 3704.747 kb on - strand at 3704.747 kb on - strand at 3704.747 kb on - strand at 3704.899 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.001 kb on + strand, within Psest_3524 at 3705.002 kb on - strand, within Psest_3524 at 3705.002 kb on - strand, within Psest_3524 at 3705.010 kb on + strand, within Psest_3524 at 3705.010 kb on + strand, within Psest_3524 at 3705.010 kb on + strand, within Psest_3524 at 3705.011 kb on - strand, within Psest_3524 at 3705.011 kb on - strand, within Psest_3524 at 3705.011 kb on - strand, within Psest_3524 at 3705.011 kb on - strand, within Psest_3524 at 3705.011 kb on - strand, within Psest_3524 at 3705.717 kb on + strand at 3705.717 kb on + strand at 3705.717 kb on + strand at 3705.717 kb on + strand at 3705.717 kb on + strand at 3705.718 kb on - strand at 3705.718 kb on - strand at 3705.718 kb on - strand at 3705.718 kb on - strand at 3705.718 kb on - strand at 3705.718 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,702,718 - Psest_3522 0.59 -0.2 3,702,718 - Psest_3522 0.59 +1.2 3,702,718 - Psest_3522 0.59 +0.9 3,702,832 + Psest_3522 0.74 -0.4 3,702,832 + Psest_3522 0.74 +0.3 3,702,832 + Psest_3522 0.74 -0.1 3,702,833 - Psest_3522 0.74 -0.3 3,702,833 - Psest_3522 0.74 +1.2 3,703,114 + +0.4 3,703,114 + +0.6 3,703,114 + +1.4 3,703,114 + +0.4 3,703,114 + +0.1 3,703,114 + -0.9 3,703,118 + +1.3 3,703,225 + -1.0 3,703,226 - +0.0 3,703,248 - +0.7 3,704,317 - Psest_3523 0.74 -0.1 3,704,619 - +0.1 3,704,746 + -0.2 3,704,747 - +0.9 3,704,747 - -0.1 3,704,747 - +1.9 3,704,747 - -0.1 3,704,747 - -0.4 3,704,899 + Psest_3524 0.19 -0.5 3,705,001 + Psest_3524 0.30 -0.4 3,705,001 + Psest_3524 0.30 -1.5 3,705,001 + Psest_3524 0.30 +0.4 3,705,001 + Psest_3524 0.30 -0.9 3,705,001 + Psest_3524 0.30 -0.2 3,705,001 + Psest_3524 0.30 -0.6 3,705,001 + Psest_3524 0.30 -1.5 3,705,002 - Psest_3524 0.31 -1.6 3,705,002 - Psest_3524 0.31 -0.8 3,705,010 + Psest_3524 0.31 +0.7 3,705,010 + Psest_3524 0.31 -2.7 3,705,010 + Psest_3524 0.31 +0.5 3,705,011 - Psest_3524 0.32 -0.9 3,705,011 - Psest_3524 0.32 -0.3 3,705,011 - Psest_3524 0.32 +0.5 3,705,011 - Psest_3524 0.32 -0.7 3,705,011 - Psest_3524 0.32 -1.0 3,705,717 + +2.1 3,705,717 + -0.2 3,705,717 + +0.3 3,705,717 + +1.2 3,705,717 + +0.9 3,705,718 - +0.2 3,705,718 - -0.3 3,705,718 - -0.8 3,705,718 - +0.6 3,705,718 - +0.4 3,705,718 - -0.6
Or see this region's nucleotide sequence