Fitness data for Xcc-8004.1350.1 in Xanthomonas campestris pv. campestris strain 8004

Type IV pilin PilA
SEED: Type IV pilin PilA
KEGG: type IV pilus assembly protein PilA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L2P4 -0.2 -1.0 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.2 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.0 compare
control PBS control -0.1 -1.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.1 -1.1 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.1 -0.9 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.1 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.9 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.1 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.8 compare
clovis xylem sap Clovis xylem sap +0.1 +1.1 compare
clovis xylem sap Clovis xylem sap +0.1 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.3 +2.6 compare