Fitness data for HMPREF1058_RS17490 in Phocaeicola vulgatus CL09T03C04

RagB/SusD family nutrient uptake outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -0.6 -2.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.5 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -0.5 -2.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -0.5 -2.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2 -0.5 -2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 -0.5 -2.2 compare
phosphorus source Ribonucleic from torula yeast type VI 1 mg/mL phosphorus source -0.4 -1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -0.4 -1.9 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.4 +2.7 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.4 +1.7 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 +2.5 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.4 +2.1 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.4 +3.1 compare
carbon source Amylose from potato 2.5 mg/ml (C) +0.4 +1.3 compare
phosphorus source Galactose 1-phosphate dipotassium salt 1 mM phosphorus source +0.4 +2.1 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.4 +3.0 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.4 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.4 +2.2 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +1.9 compare