Fitness data for HMPREF1058_RS13870 in Phocaeicola vulgatus CL09T03C04

glycoside hydrolase family 88 protein
SEED: Rhamnogalacturonides degradation protein RhiN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Amylose from potato 2.5 mg/ml (C) -0.8 -3.3 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -3.6 compare
carbon source Amylose from potato 5 mg/ml (C) -0.4 -1.9 compare
carbon source Tara gum 2.5 mg/ml (C) -0.4 -1.8 compare
carbon source Arabinoxylan (Rye Flour) 2.5 mg/ml (C) -0.4 -1.8 compare
carbon source Arabinan from sugar beet 5mg/ml (C) -0.4 -2.6 compare
carbon source pectate 2.5 mg/ml (C) -0.4 -2.5 compare
carbon source Dextran 5 mg/ml (C) -0.4 -1.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.3 -2.3 compare
carbon source Polygalacturonic 5 mg/ml (C) -0.3 -2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.3 +1.7 compare
carbon source Bioecolians 10 mg/mL (C) +0.4 +2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 +0.4 +1.6 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +2.0 compare
carbon source Yacontrol (Yacon root syrup) 10 mg/mL (C) +0.4 +3.0 compare
phosphorus source phosphate monobasic 1 mM phosphorus source +0.4 +2.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.5 +2.0 compare
phosphorus source Uridine 5-monophosphate 1 mM phosphorus source +0.5 +2.5 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +2.3 compare
carbon source Beta-Lactose 10 mM (C) +0.8 +3.2 compare