Fitness data for HMPREF1058_RS09680 in Phocaeicola vulgatus CL09T03C04

site-specific tyrosine recombinase XerD
SEED: Phage integrase
KEGG: integrase/recombinase XerD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.8)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -3.9 -2.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -3.7 -2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -3.6 -4.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -3.5 -3.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 -3.5 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -3.4 -3.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -3.4 -3.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -3.3 -2.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -3.2 -2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 -3.2 -4.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 -3.2 -3.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -3.1 -3.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -3.1 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -3.0 -4.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -2.9 -3.9 compare
carbon source Vitagos 5650 10 mg/mL (C) -2.9 -5.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -2.9 -4.8 compare
phosphorus source DNA from Salmon 1 mg/mL phosphorus source -2.9 -4.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 -2.8 -3.4 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) -2.8 -3.7 compare