Fitness data for PS417_14875 in Pseudomonas simiae WCS417

polyisoprenoid-binding protein
SEED: Probable signal peptide protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.6 compare
motility inner cut, LB soft agar motility assay -0.8 -2.2 compare
stress methylglyoxal 0.032 vol% -0.7 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.7 compare
soil soil sample 2; outgrowth in LB -0.7 -1.8 compare
phage JP1 MOI 0.1 -0.7 -1.8 compare
soil soil sample 5; outgrowth in LB -0.7 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.8 compare
phage P. simiae ORA MOI 0.1 +0.6 +0.7 compare
phage JP1 MOI 1 +0.7 +1.2 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.7 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +3.0 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.9 +4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.0 +2.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.2 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +0.9 compare