Fitness data for BPHYT_RS30945 in Burkholderia phytofirmans PsJN

LacI family transcriptional regulator
SEED: Transcriptional regulator, LacI family
KEGG: LacI family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -1.2 -2.3 compare
phage 24hr PHYTO6 MOI 10 -1.2 -1.8 compare
phage 36hr PHYTO6 MOI 1 -1.1 -1.8 compare
phage 24hr PHYTO1 MOI 10 -1.1 -2.4 compare
carbon source Sebacic (C) -0.9 -1.9 compare
phage 36hr PHYTO8 MOI 10 -0.9 -2.2 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.9 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.8 -1.5 compare
phage 36hr PHYTO3 MOI 0.1 -0.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.8 +3.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.9 +2.4 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9 +2.4 compare
carbon source L-Arabinose (C) +0.9 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.5 compare
carbon source Xylitol (C) +1.0 +4.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.1 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days +1.2 +6.6 compare
carbon source D-Xylose (C) +1.4 +4.1 compare