Fitness data for BPHYT_RS29225 in Burkholderia phytofirmans PsJN

diguanylate phosphodiesterase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.1 compare
no phage control No phage control -0.5 -2.1 compare
nitrogen source L-Lysine (N) -0.5 -1.6 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -1.4 compare
carbon source Phenylacetic 5 mM (C) -0.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.6 compare
nitrogen source NAG (N) -0.5 -2.3 compare
phage 24hr PHYTO6 MOI 10 -0.5 -1.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.3 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 -1.6 compare
stress Paraquat dichloride 0.032 mg/ml +0.4 +2.0 compare
temperature LB, 37C +0.4 +2.4 compare
carbon source D-Galactose (C) +0.5 +2.1 compare
carbon source L-Malic (C) +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.7 compare